 |
Simple sequence repeat (SSR)
>UN18787
GACAAATCATGTCAACTTGTAGACACAAAAGAGATAATCAAAAGGACATTATACAGTTTCTCAGTTCTCTAATTAATGTTTTCTCAGTCTTTTA
ATCATACGAACAAAATCTAAAAAATCGATCTTTAAAAATACAGTACAGAAGGAACGTGATGTACTCTGAAAATCTAACGCTCTTTCCTCCAAAT
GATACACAGTGCCTCACATCTAGCGCCTAGGAGGAAACGTGGGCATGAAATCTTGTGATTTTGGGAGAGGGACTTCATGAAACCAACTATGGTT
GAGAGCTTCCTCCACTGTTAGACGTTTCTCAGGATCCAAAGTTAGTAAACCATTCAGCAAATCAAATCCACGTTCTGAGAGTATCTGACCACCT
ACAAATGATATCGCTGGAAACTTCTTACGCAACAAATTGTACGATTGTGTAGGAAACTTGGCTTTGGCATTGGGTAACGATGAGAATCCAGGCC
AGATTGACTCGTTTGGTGTTCCAAGGACCGCAAAGATCTTTTGAAGTTGGTCAAGTTCAGTCTTGCCCGGGAACAAAGGCTTTTGAGACAAGAG
CTCCGCCATAATGCAACCTATTGACCACATATCAACAGCCGTAGAGTACTGCTTCGCTCCTAGAAGAAGTTCTGGTGGTCTGTACCACTGAGTG
ATGACCATCTGTGTGTAAGGCTTGATAGGGCTCCCGTACTGTCTCGCCATACCAAAATCACAAATTTTCAACTCCCCAGTGTTGTTCATCAGGA
GGTTAGATGGCTTCAGATCCCTGTGGATGATCCAGTTCGTGTGGAGGTAGTGGACACCCTCCAGTAGCTGCAGCATCAAGCACTTGACCTCGCT
GGTGCTAAAAGGCTGTTTCTTTCTTTCCATTAAGCACTTCAGGTCGTGTTCCAAGTGTTCCATGACCATGTAAACGTCGCTGTCGTTCTTCCCT
CCGACCACAACCTCCTTTACATTCACTATTGAAGGGTGATTGCATGACAGAAGTATGTTGATTTCCCTCAGAGACGTCAAAGGGAATCCGTACC
CTTCTTCGTACTTGTCTTCCTTCATCTTGATCTTCTTGAGCGCCACAATCTCCTTTGTTTTCTCATCCCTCGCTCTGTAAACAATACCGTATGT
ACCTTCGTTAATCTGTTTTAGCTTCTGAAACCCATTCACAGACCTGCTACCAAGTAGCATGTTCATCACTCCCTGGGCTGGAGAAGCCGGTTCT
TCAGCTTCTAACTCGTCATTAGGAGAACTACAATACTCATGATCAGAATATCCATTAGCGCTAAGCTTCTCTACGCTCTGATGCCCACTACCAG
ATCCAGATGAATTGGATTGCCGTTCTTCAGACACCACTAACTCACCACACTCCGGACTCAAACTGCTCCTGTTCCATCTGCTAGTCTTGGGAAC
AACATTATCAGCATGAGATACTACCTCCTCATTGTGGGAAGTTAAACCCGTCTCCCATCTTGATAATTTCTTAACAGGTGATATCTGCTTCACC
TGCTGTTCTTCCTCCAACTGACCCTCTTCCAATTCATCAACAGGTTCTTCCGACATCACAACATTGACCTGATCCTTCGGAGAAGTCCTCCTAG
CAAAATTTACATCAACATTAAGTATCCCAGGCCCCTGAGCTTCAACAGGTTCTGGTGACATCATCACGTTGACCTGATCCTTGGGAGAAGTCTT
CCTAGTAAGAGTTACATCAACATCCTGCTTACGTGTCGGATTCGTAGTCAGACTAGTGAAACTAGACCTTGTCTTCTCCCTAGAAGTAGGAGCT
TTAGAAACTTTATCTTCAACGTCGTCCCACAAGATAGGTGAAAACTTCCTCCTCTTCTCAGCGGGTCTCTGACCCTCCTCCCTCCCCTTTCTCA
GAAACCAACCGTGACCGGTTACGCCCATCAAACCTCCTGAGACCTTGCTCGTTAAGCGGTGGTTTAGTTTGAGGACGCCTCTCACCATCTCCAC
GAGCACCGTTCCTGTAAAAGTCGTGGTCTTTTTTGACGGAAAGAGAACTTCTAGAGACATCAACTCCTCCCCCTGCCGCCATCGTATTCTTCTC
AATGAGATAATTGAATCGTATACAAGAAAAAATCAAATTGATAACAAAGAGAAAAGAGAAATCAACCCAATCAACGAAACCCTAGAGAATCAAA
TCACGATAAGCAAGATTCGAATCGATCAATCAACCAATTCAAGAAAAATTAGAAACCCTAGAAATTCAATTTTCCAGGGATGCGATAGGTTTTT
TTGGTTTCCCTTGATCTCCTCCGATTCAAACAAGTTCCGGAAGGTCTTACCGGAGGGAAGGTAAGAAGAGAACGGAGGAGGATTGAGATGGAAG
GAGATCGATCTACGGAGCCGATGCGATCGCCAGAAGCAACTTCGTGAAGCCTCTCTCTCTCTCTCTCTAAATAATTCTTCGAGACGCGTTTTCA
ATCTCC |
Primers for UN18787 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
TCGAATCGATCAATCAACCA |
60.009 |
20 |
GAAAACGCGTCTCGAAGAAT |
59.457 |
20 |
265 |
2179 |
2443 |
| 2 |
GGTTTCCCTTGATCTCCTCC |
59.874 |
20 |
GAAAACGCGTCTCGAAGAAT |
59.457 |
20 |
185 |
2259 |
2443 |
| 3 |
CCTTGATCTCCTCCGATTCA |
60.15 |
20 |
GAAAACGCGTCTCGAAGAAT |
59.457 |
20 |
179 |
2265 |
2443 |
|
|
