Simple sequence repeat (SSR)
>UN18808
GGCTATGCAATGCTTCTTTTAAGTTTTCATTATAATGGAAAGGAAGTCTAGTTGAAGATTATAAGATTTTGATCCAAATATATGATTACATACC
AAATTTGAGATACTGAACCATAGAAATAGATAGAGATAAGGACATTAAAGGTGGATGGCTGAATCAGTAGCGGCAGACCTTGGCCGTAGGCATT
GTCACACAAACTTGAGCGTATTTCTTCTTAGCCGCTTCTGTCCCTCGCTTGGGCTCCTCCTCATCCGCCATGGCTACCTTAGCCAAGGCACAAA
CGGCAGAAGCTGCAGCCGTGAACATTATATCCCTCCTCATTGTGGTGCTTCTCTGTTCTTCCTTGGGCTTGACTTCTAAGGTGGTTGTGTTCTC
GCTCGTTGAGGCTCTGACCATGGACATCCTTCTTCCTGCGGTGGGTGACGGAAGCTTAGCGACGGCTGGGAGGAACGTTGCTGTCATTGTCATC
GATGCCATTGCTTGAAATCTACGTTTGATTTGACCCTCTCTCTCTCTCTGCATATCGTTAGAGCTTGTGAGATGGTTGAATGT |
Primers for UN18808 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
GTTGTGTTCTCGCTCGTTGA |
60.032 |
20 |
CATTCAACCATCTCACAAGCTC |
59.74 |
22 |
187 |
366 |
552 |
| 2 |
GCTCTGACCATGGACATCCT |
60.08 |
20 |
CATTCAACCATCTCACAAGCTC |
59.74 |
22 |
166 |
387 |
552 |
| 3 |
GGAGGAACGTTGCTGTCATT |
60.119 |
20 |
CATTCAACCATCTCACAAGCTC |
59.74 |
22 |
108 |
445 |
552 |
|
|
