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Simple sequence repeat (SSR)
>UN18867
CTTGATACTTCTCCGATCACCAATCACCGGCCTTCACACCCTCCTCGTCTTTCTCCACTCCCTCTTATAAAAACAAAAAAAAGCCAATTCACAT
CTCTCTCTCTCTAAATGGCGTCGGTGTTCCTGTATCACGTGGTGGGAGATCTGACGGTGGGGAAGCCAGAGATGGTCGAGTTCTACGACACCGA
GACCGTCGAGTCCGCCATTCGCGCCATCGGAGAGTCCACCGAGTGCGGGATTCCGGTCTGGAGAAAGAGATCTCTTCCTCCTCCTCTTCCTCAT
CCTCACGGTGGCGGGGGGTTGGCGGTTGAGAACAGCGAGATGAGGCAGCAGAGGTTCGTTGGGATCCTGAGCTCGCTGGATATCGTTGCGTTCT
TAGCTAAGAGCGAGTGTCTTGAAGAAGATAAAGCGATGAAGATCCCTGTCTCTCAAGTCGTTTCCCCTAACAATTCTCTCCTCAAACAAGTTGA
TCCTGCCACCAGGTTGATAGATGCTTTGGAGATGATGAAACAAGGAGTGAGACGACTTCTAGTTCCGAAAAGCGTTGTTTGGAGAGGTATGAGC
AAGAGATTCTCCATTCTTTACAATGGAAAATGGCTGAAGAACAGCGAAAACTCTAGCAGTAGCAGTGGGCTCTCCGCTGACTCCAACAGGCCTG
CTACTTCCAAGGCTTCAAGCCGGGACAAGTTTTGCTGTCTCTCAAGGGAAGACGTGATCCGCTTCCTCATAGGTGTCCTTGGAGCATTAGCTCC
TTTGCCACTCACATCAATCTCTTCTCTTGGAATCATCAATGTAGACTACAACTTCATTGAATCCTCTTTGCCAGCCATCGAAGCCACCAAAAGG
CCACCATGTGATCCTAGTGCGATCGCCGTGTTGGAACAAACCGAGGACGAAAAACAGTTCAAGATAATAGGAGAAATCTCAGCTTCGAAGCTCT
GGAAATGTGATTATCTCGCTGCAGCTTGGGCTCTAGCTAATCTATATGCAGGGCAGTTTGTGATGGGAGTTGAGGACAACATGTCATCAAGATC
ATTCAGCGACTTCCTCCAAACTTCATTTGTCGGAGGAGGAGGAGGAGACCAGAACGGAACAGCTACGACAAAGGCCAAGAAATTCAGTAGCAGG
AGCATCGGTTTCAATCCGACAAGCCCGACAAGACTGAGCATCGGTAGGAGCATGTACAGGGGAAGAAGTGCGCCGTTAACTTGCAAAACATCGA
GCTCATTGGCTGCGGTTATGGCTCAGATGCTGTCTCATAGAGCCACACATGTTTGGGTTACAGAGGCTGATTCAGATGATGATATTCTTGTTGG
AGTAGTGGGCTATGGAGAGATCTTAGCTGCTGTTACTAAACAGCCTTCTGCCTTTGTTCCTTCGAGTCGTTCTTACGAAGGTTTTGGTAATGAA
AATCAAAGCTAAGAAGACTACTACACAAAATCAAAAGGATAAACGACTTATTTCTGAGAGAAAGGGACACAGTTTTTTTGGGTGTGTTTGTCAA
AATTGTGTACTATTGAACTTAGTATCAGATAGCTCCAATAAGCAAAAATAAACGAGCTATGATTTTTCTTTCTTATTCATTACTATGTGAACTG
TTGTTGGTGTTTTAGTGTTTACAGCATATGTATAAACAGATTTGTCCTATTATTTCTTAAGAGATATATTGTATTACAGAC |
Primers for UN18867 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
TCACACCCTCCTCGTCTTTC |
60.238 |
20 |
CACGTGATACAGGAACACCG |
60.025 |
20 |
102 |
34 |
135 |
| 2 |
TCACACCCTCCTCGTCTTTC |
60.238 |
20 |
TCTCTTTCTCCAGACCGGAA |
59.92 |
20 |
225 |
34 |
258 |
| 3 |
TTCACACCCTCCTCGTCTTT |
59.697 |
20 |
CACGTGATACAGGAACACCG |
60.025 |
20 |
103 |
33 |
135 |
|
|
