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Simple sequence repeat (SSR)
>UN18971
GGGAGCTCCGTTCTTCCTCTGTTTACTTGTCTTCTTCCCTTGACACTGCTACTCAGATCCTCCCGGTTTACGCGGGAACAGCGTCGACTGAACC
GTTCAGCTTACGACGGACATTCCTCCGTGGAGTCTGTCTCGCAGCATTCCCGTCTCTCTCGCACCTGATTCGTCCATCATGTGAAAGGAAGCCC
TAGTCGAGTCTCTGTTTCTAGCTTAGGTTTGGTTTCAGAGGAAGGAAGGAAGGAAGGAAGGAACGAACGAAGATCAAATCGAAGAGGGGTTTCA
TTAGGAGGGAGGAAGGATGTATCGTGACAAAAAGGGAGAAGCCTTTGTCTATGATCGCCGAAGTAAATTGTATGAGATGGTGGATGATCCTTCA
ACAGATTCAATAGTTTCGTGGAGCGAGAGCGGGAAGAGTTTCATCGTTTGGGATGACGTGGAGTTTAGAAAAGCTCTTCTTCTTCCCGGAGGGT
GCCTTGGATACTTGGGCTTTTCACAATCTCAATCTCAATCTCATGAGCAATGCGAATACGCATGCCCTTATTTTATGAGAGGCCAGCCTGACCT
TAAACCGTCACAAGACGACCTCATTAGAAAGATTGAGACCGACAACAACAAGGGCTTGGACAGTAGCAATGATGATGGACTTATTCGCTTTAGC
AGCCTTTCTTGCTACCAAGAGATGGCTAGGCTTGCCAAGAAGGAGCGTCCCCCTTCCTCATCAATTCGATGCCCTCCCCCCCTTTTCATCAGAG
ACGTGTACGATATGTTGGATGATCCTACAGTTGATTCAGTTGTCTCGTGGAGTGAGAGCGGCAAGAGTTTCGTCGTTTGGAATGAATCTAAGTT
CCTCGGAGATGTTCTTCCTAGTCGCTTACCCTTCAATTACAAAGATATGACATCCCTCACCACCCAGTTTCATGCCATTGGCTATACTAAAGTT
GAAGAATCTGAGCATTGGGAATACGCATCCGATTATTTGGTGAGAGGTCAGCCTCCCCCCCCTAAGGATAAATCCCCATGCACTCCTGGCGGTC
TTATGATTACTCCAGAACTTGCCAGACTCATCGAGAGATCCTTTGCTTGCTCGCAAACAATAAGCTAGTTGCTCTACTCTCGTGGTTGTTGTTG
TTGTTGTTTTCTTAATCGTATTTTATCGTCCTGTTTGAAAAACATTATTATGTTTGGTCTCTCTCTTTTCTTTTAACTTATGGTTTGTAAGATA
CAAAGATGGTTGATGTTTTTTATTTTTCTTTTGCATTTTTAATAAGATAGATCATTATGGTTGATC |
Primers for UN18971 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
CGAGAGATCCTTTGCTTGCT |
59.717 |
20 |
AATGTTTTTCAAACAGGACGA |
57.262 |
21 |
109 |
1066 |
1174 |
| 2 |
AGAGATCCTTTGCTTGCTCG |
59.717 |
20 |
AATGTTTTTCAAACAGGACGA |
57.262 |
21 |
107 |
1068 |
1174 |
| 3 |
GAGCATTGGGAATACGCATC |
60.444 |
20 |
AATGTTTTTCAAACAGGACGA |
57.262 |
21 |
225 |
950 |
1174 |
|
|
