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Simple sequence repeat (SSR)
>UN19045
GGGCCTGGCTTCTCATCTTGGTTTCCTGCTGTTAACAACTATTCAGCAATGAATATTCCTCAAGTCTTGCCTGAACGAGGCAATGGACCGCAGA
GAATGGTTGGTCAAACATCTGAAGTTTCATCATATACACCTGATATGTACAGAGGCCCTGTTTTATTGTCTTCTCCAGCAGTTTCATTCCCACC
CACAGCATTTCAGTATCCTGGGTTTCCTTTTGGAACCACCTATCCTCTTTCCTCAGCAAACTTTTCAGGTGCTTCAACAGCATACATGGACTCT
TCATCAAGTGGCAGGCTATGCTTCCCTCCTGTCAACTCCCAAATGTTGGGTCCAGGAGTTACCATCCCTTCTAACTACCCAAGGCCTTATGTTG
TTAACCTCCCAAACGGTAGTAGCAATGGTGGAGTTTCGGACAGCAACAATGCAAAATGGTTTAGATCTGGTCTTGACTTAAACTCTGGACCAGG
AGGGCATGAAACTGATGAAGCAGCAGCACTTGTACAAAGACAACTATCTTCCTCTAGTTCTTTACCTTTGAGAGATGAAGCAAGAATGTATCAA
ATGTCAGGTGGTACTCTTAAGAGGAAGGAACCAGATGGTGGGTGGGGATGGAGGAGGATACAAGTAATCCTTATGGCAAATAACAAACCTGTGA
ATTTCTTTGTAGGCCGTTGCACTAAGGCTGTACTCTGAAGATAAAAGCAGACAGCACGCCACAAAGGACAGTTTTTTAGGAAAAAAAAAAATCT
GACCCCTCTGTTTTACAATCATTCGTGTAGATACTTCCAAACAGTTTCGGTTTTTCACAGGCATGGCTTATAAAACTTTCAGATAAACACAAGA
CCATCATCATCATCATCGCTTTGTTTATTTGCTCTCATCTCCCAGAGTTTTCACCAGGTGATCTTTTTAAAAACTACACACTACTCTTTGCCTT
TGTCTTCTTTAACATCTATCTATGTATCTGGGCCAAAAGGCAAGGCGAGAGTGTTTAGTTTATGTTTTTTTTTAAAAGCTCTGCTGTAAGAAAG
AAAAATGATGGTGATGGTCCTTGAAGCATTTGTTGGCATGAGACTGAGATTAGAATTTGCCATGGTTTGTATTATATAGTCAGCAAACTCTTTT
CTAGACTGTTCTACTTGTGGTAGTTATGTGTCGAACAAGTGAACTTTTACTCTTATGTTACAACAATATGGCTGATGACAGGTTTGAAACAATA
AACACAATTGAGTTGACAAGAGTAAATCTCTCCATCTCTCTCTCTTCCATGTAATCTATTGATTAAGTAGAGGCTAATAACTCTCTTACATGAT
TCAATCTATATATATAATGTGTTTCTCATTTATCATACAAACTCAAAAGTGGAATTCCAGAACATAAAGACAGAGAGTTTAGGTTCATCATATC
ATCATCAATGCCGAGTCACTATCCTCCCACACAGAACGTTTGATAAACACCCGTGGTGGTGGTTCGACTGTTGCTTCTTCTTCTTCTTGGTCTT
GTCCTTTTGTTTAACCACCGGTTTGATCACTTCCTTGATTGCGGAATCAAAAACTGCTTTCACATTCTGTTGAGTTTTTGAGCTACATTCAATG
TAATATGTTGCGCCTATTAGCTTACGCAACTCCTCTCCCTGTGCAGTAGTTACAGGGGATAGTCCAGGATGGTCAGCCAGATAATGCTTATCCT
CACGGAGATCTAATTTGGTACCGACAAGAACTAATGGAACTCCTGGAGCAAAGTGTTGGAGCTCAGGGATCCACTTTTTAAAAACATTTTCATA
GCTAGCTCTGCTGACCAATGAGAAAGACAAGACGAAAACATCTGCTCCTCTGTAACTTAAAGGCCTTAGTCTGTTGTAATCTTCTTGCCCAGCA
GTGTCCCATAGCCCTAAGTTCACAGTGGTGCCTTCAACTACAACGTTTGCACTGAAGTTGTCAAAAACCGTTGGTACATAGTCAGTAGGGAATT
TGTTGCTGGTGTAGCAGATGAGCATACAGGTTTTACCAACGGCGCCATCACCAACAGTTACACATTTGATGAACTTTGAAGCACTTGAAGCCAT
TCTTCTTCTCTACAACACAATCACAAGACGAAGAAAAAAAACAGAGAGAAATAAAATGAAGTGATTACTTTCC |
Primers for UN19045 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
CGCCACAAAGGACAGTTTTT |
60.147 |
20 |
CCTGGTGAAAACTCTGGGAG |
59.691 |
20 |
190 |
715 |
904 |
| 2 |
TTTCGGTTTTTCACAGGCAT |
60.481 |
20 |
CTAAACACTCTCGCCTTGCC |
60.015 |
20 |
202 |
797 |
998 |
| 3 |
TTTCGGTTTTTCACAGGCAT |
60.481 |
20 |
ATGCTTCAAGGACCATCACC |
59.934 |
20 |
267 |
797 |
1063 |
|
|
