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Simple sequence repeat (SSR)
>UN19045
GGGCCTGGCTTCTCATCTTGGTTTCCTGCTGTTAACAACTATTCAGCAATGAATATTCCTCAAGTCTTGCCTGAACGAGGCAATGGACCGCAGA
GAATGGTTGGTCAAACATCTGAAGTTTCATCATATACACCTGATATGTACAGAGGCCCTGTTTTATTGTCTTCTCCAGCAGTTTCATTCCCACC
CACAGCATTTCAGTATCCTGGGTTTCCTTTTGGAACCACCTATCCTCTTTCCTCAGCAAACTTTTCAGGTGCTTCAACAGCATACATGGACTCT
TCATCAAGTGGCAGGCTATGCTTCCCTCCTGTCAACTCCCAAATGTTGGGTCCAGGAGTTACCATCCCTTCTAACTACCCAAGGCCTTATGTTG
TTAACCTCCCAAACGGTAGTAGCAATGGTGGAGTTTCGGACAGCAACAATGCAAAATGGTTTAGATCTGGTCTTGACTTAAACTCTGGACCAGG
AGGGCATGAAACTGATGAAGCAGCAGCACTTGTACAAAGACAACTATCTTCCTCTAGTTCTTTACCTTTGAGAGATGAAGCAAGAATGTATCAA
ATGTCAGGTGGTACTCTTAAGAGGAAGGAACCAGATGGTGGGTGGGGATGGAGGAGGATACAAGTAATCCTTATGGCAAATAACAAACCTGTGA
ATTTCTTTGTAGGCCGTTGCACTAAGGCTGTACTCTGAAGATAAAAGCAGACAGCACGCCACAAAGGACAGTTTTTTAGGAAAAAAAAAAATCT
GACCCCTCTGTTTTACAATCATTCGTGTAGATACTTCCAAACAGTTTCGGTTTTTCACAGGCATGGCTTATAAAACTTTCAGATAAACACAAGA
CCATCATCATCATCATCGCTTTGTTTATTTGCTCTCATCTCCCAGAGTTTTCACCAGGTGATCTTTTTAAAAACTACACACTACTCTTTGCCTT
TGTCTTCTTTAACATCTATCTATGTATCTGGGCCAAAAGGCAAGGCGAGAGTGTTTAGTTTATGTTTTTTTTTAAAAGCTCTGCTGTAAGAAAG
AAAAATGATGGTGATGGTCCTTGAAGCATTTGTTGGCATGAGACTGAGATTAGAATTTGCCATGGTTTGTATTATATAGTCAGCAAACTCTTTT
CTAGACTGTTCTACTTGTGGTAGTTATGTGTCGAACAAGTGAACTTTTACTCTTATGTTACAACAATATGGCTGATGACAGGTTTGAAACAATA
AACACAATTGAGTTGACAAGAGTAAATCTCTCCATCTCTCTCTCTTCCATGTAATCTATTGATTAAGTAGAGGCTAATAACTCTCTTACATGAT
TCAATCTATATATATAATGTGTTTCTCATTTATCATACAAACTCAAAAGTGGAATTCCAGAACATAAAGACAGAGAGTTTAGGTTCATCATATC
ATCATCAATGCCGAGTCACTATCCTCCCACACAGAACGTTTGATAAACACCCGTGGTGGTGGTTCGACTGTTGCTTCTTCTTCTTCTTGGTCTT
GTCCTTTTGTTTAACCACCGGTTTGATCACTTCCTTGATTGCGGAATCAAAAACTGCTTTCACATTCTGTTGAGTTTTTGAGCTACATTCAATG
TAATATGTTGCGCCTATTAGCTTACGCAACTCCTCTCCCTGTGCAGTAGTTACAGGGGATAGTCCAGGATGGTCAGCCAGATAATGCTTATCCT
CACGGAGATCTAATTTGGTACCGACAAGAACTAATGGAACTCCTGGAGCAAAGTGTTGGAGCTCAGGGATCCACTTTTTAAAAACATTTTCATA
GCTAGCTCTGCTGACCAATGAGAAAGACAAGACGAAAACATCTGCTCCTCTGTAACTTAAAGGCCTTAGTCTGTTGTAATCTTCTTGCCCAGCA
GTGTCCCATAGCCCTAAGTTCACAGTGGTGCCTTCAACTACAACGTTTGCACTGAAGTTGTCAAAAACCGTTGGTACATAGTCAGTAGGGAATT
TGTTGCTGGTGTAGCAGATGAGCATACAGGTTTTACCAACGGCGCCATCACCAACAGTTACACATTTGATGAACTTTGAAGCACTTGAAGCCAT
TCTTCTTCTCTACAACACAATCACAAGACGAAGAAAAAAAACAGAGAGAAATAAAATGAAGTGATTACTTTCC |
Primers for UN19045 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
CATCATCAATGCCGAGTCAC |
60.08 |
20 |
ATTCCGCAATCAAGGAAGTG |
60.074 |
20 |
142 |
1410 |
1551 |
| 2 |
CATCATCAATGCCGAGTCAC |
60.08 |
20 |
ACAGGGAGAGGAGTTGCGTA |
59.867 |
20 |
231 |
1410 |
1640 |
| 3 |
CATCATCAATGCCGAGTCAC |
60.08 |
20 |
CCGGTGGTTAAACAAAAGGA |
59.833 |
20 |
116 |
1410 |
1525 |
|
|
