 |
Simple sequence repeat (SSR)
>UN19144
GCAGGTATCAAAGCAGAGAAAATGAATGAACAAAGACAGTCTCAAGAACGTGGGAACATAGACAACAATGTAGCAACAACAACAAAAAAAAAAC
AATTAACAAGAAGATCTTACAGGAAACAAAAAAAAATATTATAATAATAATAATGGGAACTTGGAAGAAGAAGAAGAAGAGACCCAAATATTGA
AACTTTTCTCCTGAATTGATGATATCACAATTCTCTATATAGCTCTAAACCCTCATTTACCCTTTTCGCATTCCAACTTCTTCCAACCGTTTCC
AAGTGGCTTCACGTTTGGCCTTGGTCTCACCTTCCTTTGATTCGTCTTCTTTGAACTTAGCAAGGCATTCCTTGAACAGCTCAGGGTCCAGGTC
TTGGAATATCTTCCTCACGTTTAGCGTCAAGCTATGAACAGCTTGGTTCCAATGTTTCTGTGCGTTTCTTTCCAACGCAGGGAATATAATTGGG
AGAATGACTTTGCGGCTCTGCATTATCAGATTCTCTATGTGATTGTTGTTCCATAAGAATAAAGCTCTCTCTGCCACCTGAAAATGCAGGCTGT
TCAAACACCGAGCTATCTGGCGAAAGAGCGGCACCATACACCGTTGGAACTCCGGAGGCTGTGTCGCTTCAAGCACTTCCTCCAACTCATTCAA
AAACATGACTTCTTTGGAACTATTCGTCACGGGCCAGTACTTGAGCAACCCTCTTATAACCGTATCAGCGAGTTTGCAATCCTTCTCCACAAAC
TGCGTGATGCAATAAGACAACTGCTGGTGATACATCTGCAAGCACTTGGGTTTGTGGAGCGGTATCAAAACCCGAACCAGAAACACTTTGTGCT
CTTCTTTCAAAGGAAGAGCGAAACCGTTGATTATACTTCCCAAGATCTCGAGGAACTCGGCGATCCCGTTGTGTTTCTCTGTCTCGAAGACGAA
CCTGTAGAAGATGTTGTTTATCGACTTCCTGATGAAAGGACGGTGGACCATGAATTTGCCGTAGATCCGGTGGAGGATTGTTTTGAGGCAGTCT
CTCTCTCTAGGATCCTCTGAATCAAACAAGTCTAGTAGCCTCAGGACGAAGGATTGGTCTATGTATCTTTTGGCCAGTTTGGTGTCGGTCTCAG
GGGAAGCAACGAACCTCAGGAAAAGCTCGTAGACGAGCTGCAAGTGAGGCCAGGCGAGATCCATCGAAGGCTCTTCCTCCTCGAGGTCTAAAGC
GTCGATGACTTTGTTCTCGCGTGGCTGTGGGTTTAGCGTTCTGAAGATGTTTGCTGAGACCATGCGCACGACTTCTTGGACGCTACCTTCGCTG
AACTTCCCGTTCGCGGAGTTCACGTAGTCCACGAGCTCGAGTAAGGTTTGTCTCTTGATGTCTTTCTCCTTGATGTTCTTTGTGGGATCAGTGA
AGTCGAAGACTACGCGGCAGAGGTTAAGCTTCTTTATGAAGAGGGTTTGCTTTTCGGTGTTGGGGACGTCTTTGAAACTTGGTAATGCTTCGTA
AGGAGTGAAGACTCCTCCATTGTTGTTGTTGTTGTTGCTCTTTGGATTAGCATCAGAGGAGGAGGCAACAGGAGGAGCGCTCTTTGTCTGTGAA
TGCTTTGTTTTCCCGACGCCATTGTTGTCACTGCTTTTGGAAGTGGAGGCGTGAGATGAAGATGAAGAAGAAGAAGAAGAAGAATGGGCACCGT
GTTCACGTCCTCCTCCACGATGATGATGGTGGTGTTCGTTCTTTGAAGACTTTTTGTTGTTGGGAAGCTTACTTAGAATCTGTTTCCACATCCT
TTAACACCAACCACAACTTAGATTCTCTTCATCATCTGGAAAAAAAAAATCGAGAAATTTTTTTTATCTTCTTCTTCGTTTAACGCAGAACAAA
TCCAGATGAGAAAGAAGAAAAAGCGATTACAACGATGACGATGATGATGA |
Primers for UN19144 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
TCCACGAGCTCGAGTAAGGT |
60.012 |
20 |
GCATTCACAGACAAAGAGCG |
59.596 |
20 |
258 |
1344 |
1601 |
| 2 |
GTCCACGAGCTCGAGTAAGG |
60.012 |
20 |
GCATTCACAGACAAAGAGCG |
59.596 |
20 |
259 |
1343 |
1601 |
| 3 |
AGACTACGCGGCAGAGGTTA |
60.037 |
20 |
GCATTCACAGACAAAGAGCG |
59.596 |
20 |
185 |
1417 |
1601 |
|
|
