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Simple sequence repeat (SSR)
>UN19144
GCAGGTATCAAAGCAGAGAAAATGAATGAACAAAGACAGTCTCAAGAACGTGGGAACATAGACAACAATGTAGCAACAACAACAAAAAAAAAAC
AATTAACAAGAAGATCTTACAGGAAACAAAAAAAAATATTATAATAATAATAATGGGAACTTGGAAGAAGAAGAAGAAGAGACCCAAATATTGA
AACTTTTCTCCTGAATTGATGATATCACAATTCTCTATATAGCTCTAAACCCTCATTTACCCTTTTCGCATTCCAACTTCTTCCAACCGTTTCC
AAGTGGCTTCACGTTTGGCCTTGGTCTCACCTTCCTTTGATTCGTCTTCTTTGAACTTAGCAAGGCATTCCTTGAACAGCTCAGGGTCCAGGTC
TTGGAATATCTTCCTCACGTTTAGCGTCAAGCTATGAACAGCTTGGTTCCAATGTTTCTGTGCGTTTCTTTCCAACGCAGGGAATATAATTGGG
AGAATGACTTTGCGGCTCTGCATTATCAGATTCTCTATGTGATTGTTGTTCCATAAGAATAAAGCTCTCTCTGCCACCTGAAAATGCAGGCTGT
TCAAACACCGAGCTATCTGGCGAAAGAGCGGCACCATACACCGTTGGAACTCCGGAGGCTGTGTCGCTTCAAGCACTTCCTCCAACTCATTCAA
AAACATGACTTCTTTGGAACTATTCGTCACGGGCCAGTACTTGAGCAACCCTCTTATAACCGTATCAGCGAGTTTGCAATCCTTCTCCACAAAC
TGCGTGATGCAATAAGACAACTGCTGGTGATACATCTGCAAGCACTTGGGTTTGTGGAGCGGTATCAAAACCCGAACCAGAAACACTTTGTGCT
CTTCTTTCAAAGGAAGAGCGAAACCGTTGATTATACTTCCCAAGATCTCGAGGAACTCGGCGATCCCGTTGTGTTTCTCTGTCTCGAAGACGAA
CCTGTAGAAGATGTTGTTTATCGACTTCCTGATGAAAGGACGGTGGACCATGAATTTGCCGTAGATCCGGTGGAGGATTGTTTTGAGGCAGTCT
CTCTCTCTAGGATCCTCTGAATCAAACAAGTCTAGTAGCCTCAGGACGAAGGATTGGTCTATGTATCTTTTGGCCAGTTTGGTGTCGGTCTCAG
GGGAAGCAACGAACCTCAGGAAAAGCTCGTAGACGAGCTGCAAGTGAGGCCAGGCGAGATCCATCGAAGGCTCTTCCTCCTCGAGGTCTAAAGC
GTCGATGACTTTGTTCTCGCGTGGCTGTGGGTTTAGCGTTCTGAAGATGTTTGCTGAGACCATGCGCACGACTTCTTGGACGCTACCTTCGCTG
AACTTCCCGTTCGCGGAGTTCACGTAGTCCACGAGCTCGAGTAAGGTTTGTCTCTTGATGTCTTTCTCCTTGATGTTCTTTGTGGGATCAGTGA
AGTCGAAGACTACGCGGCAGAGGTTAAGCTTCTTTATGAAGAGGGTTTGCTTTTCGGTGTTGGGGACGTCTTTGAAACTTGGTAATGCTTCGTA
AGGAGTGAAGACTCCTCCATTGTTGTTGTTGTTGTTGCTCTTTGGATTAGCATCAGAGGAGGAGGCAACAGGAGGAGCGCTCTTTGTCTGTGAA
TGCTTTGTTTTCCCGACGCCATTGTTGTCACTGCTTTTGGAAGTGGAGGCGTGAGATGAAGATGAAGAAGAAGAAGAAGAAGAATGGGCACCGT
GTTCACGTCCTCCTCCACGATGATGATGGTGGTGTTCGTTCTTTGAAGACTTTTTGTTGTTGGGAAGCTTACTTAGAATCTGTTTCCACATCCT
TTAACACCAACCACAACTTAGATTCTCTTCATCATCTGGAAAAAAAAAATCGAGAAATTTTTTTTATCTTCTTCTTCGTTTAACGCAGAACAAA
TCCAGATGAGAAAGAAGAAAAAGCGATTACAACGATGACGATGATGATGA |
Primers for UN19144 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
GAGGAGCGCTCTTTGTCTGT |
59.751 |
20 |
TCAAAGAACGAACACCACCA |
60.128 |
20 |
163 |
1576 |
1738 |
| 2 |
GAGGAGCGCTCTTTGTCTGT |
59.751 |
20 |
AACGAACACCACCATCATCA |
59.812 |
20 |
157 |
1576 |
1732 |
| 3 |
GAGGAGCGCTCTTTGTCTGT |
59.751 |
20 |
CGAACACCACCATCATCATC |
59.769 |
20 |
155 |
1576 |
1730 |
|
|
