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Simple sequence repeat (SSR)
>UN19351
AAGTAGTAAATGTTTGAAAATCCGATATACCTGAAAGCATTGATCTGTGTAAGAATACATAGAAATTTGTTACAAAATATAGAAAGACAATTAA
AAGCGAAAGAGTTTTATGGTGTTGGAGCTTTCTGGATTGCATTAGAATCTCCTCTCTCTCTCTCTCTCTTCGTATTGGTGTATCTATAATGCCA
AAACTCTGTATGACAGAAGAAGCGATGCCTTGCGTTCTTGTTCTACCTGTCACGCCGGTCCTTGGGGAGTTGATCGATCTTCCTTAATCTGAAC
CTGAACCTCAAGCCGGTGTTTCTAGAGAGGAACTTCAGAATCTCATCAATGATGATAACTGGAAACGAAAGATACAGAACGGCGGTCCATTCGC
CCAAGGACAATGGCGTGACAGAAAATAAGACTGCTAGTGGATGAACATATAATATTAGTATGTGCAGAACCATCGTCAGGATAATTGACCCAAC
GAGCCATAAATTACTCCTCGGGGTTATAACCAGAAGGGATTGATTTTCGCTGAGGTTATTTAGAGCATTAAACATCTCCACTACAACAAGTACT
GTCATAGCCACGGTTGATGGATGTCGATCCTCAAATATGCTGCATGGATAACTTGTCTCTCTAAGTGCGCACGTTTCAAAATTCATCAGTTCAC
TGTAAGTAAGTTTAGGACCACCATCAGAGTAAATAAACCACCATATAAAGCCAGCAACAGTTGCCAGGCCAACATAAACTCCGATAACCAAATA
GCGGAAGAATAACCACCCAGTGACCACTGCTTCACCAACCTTTCGGGGTTTTGCCTTCATAACATCGGAATCTTGTTTGTTAAAGCCAATGGCA
GTGGCAGGCAATCCATCCGTTACCAAATTGACCCACAAAAGTTGAACAGGTGCAAGGGTATCAGGAATTCCCAGTACAGCTGCTACAAATATAC
AAACAACTTCCCCGATATTTGAAGAGATCATGTATCTAATGAATTGCTTAGTGTTATTATATATAGCCCTTCCTTCCGCAACAGCCGCAACTAT
TGAAGCAAAATTATCATCAGCCAAAACCATATCTGAAGCGCTCTTAGCTACAGCTGTTCCAGAACCCATGGCAATCCCAATGTCAGCTTTCTTC
AATGCAGGGGCATCATTTACGCCGTCACCAGTCATTGCCACCACTTCATTTTGGTTCTGTAGGGCTTCAACAAGCATCCTTTTGTGAGAAGGTT
CAACCCTGGAAAAAAGTGTCATCCGTTGCAATGCTGTAGTTTGTTGCAACGCTGGAAGCCGTTCAAATTCAGAAGCCGTATAAGACAGACCAGA
AAAGTCGACCAGATTGTCGAATGCCCCTATTTTTCTACATATTGACTCTGCTGTGGACTTGTTATCCCCAGTTACGACTATAACACGAATACCA
GCAGTCATACAGGCAAGCATAGCATCTCTAACTTCTTTTCTTGGTGGATCAAGCATTCCCACCAACCCAATAAACGTCAGGTCGTTCTCATTAT
CATAAGAAATAGTTTGCTGACCATGGTGCACGGTTTTGAAGGCTAGTGCTAAGCATCTCAATGTTTCATCTCCAAAACTGGCGAACCTAGACTC
AAGTTCTGCACGGGAAGCAGCAGTGAGAGGAACAACAGAACCATCACTGTTGCAGAGAAGTTTAGTACATCTAGCAATTATACTTTCTGGAGCA
CCCTTTGAAAACATTACATCCATTTGCTTATGGCTACATAGGACGCTCATCATTC |
Primers for UN19351 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
ATGGTGTTGGAGCTTTCTGG |
60.111 |
20 |
GAAGATCGATCAACTCCCCA |
60.011 |
20 |
161 |
110 |
270 |
| 2 |
GTTGGAGCTTTCTGGATTGC |
59.82 |
20 |
GAAGATCGATCAACTCCCCA |
60.011 |
20 |
156 |
115 |
270 |
| 3 |
ATGGTGTTGGAGCTTTCTGG |
60.111 |
20 |
AGAACAAGAACGCAAGGCAT |
59.882 |
20 |
123 |
110 |
232 |
|
|
