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Simple sequence repeat (SSR)
>UN19378
ACGAAAAAACTTACTAAATATTATTCGATCGAGAATGATGGGAGAATATTTGATAATGGAATTTTCATAAGATCATTGATACAGACAAAGAAAC
GAACCAGCAAAGGAGTAGAAGCCTAAACCTACTTAGATTTCTTGACAGCAAGACTTAATATCAGTAGCAACTAGCAACAGGACCAAACCGAAAA
GAAAATAATATTAAACAGGTTTTAACCACCGAACCCATAGAGAGTTCGTCCTTGCCTCTTCAAAGCGTAAACAACATCCATCGCCGTCACCGTC
TTCCTCCTCGCGTGCTCCGTGTAAGTCACGGCGTCTCTAATCACGTTCTCGAGAAAGATCTTCAGAACCCCTCTCGTCTCTTCGTAGATCAACC
CGCTGATCCTCTTCACTCCTCCTCTGCGAGCGAGACGCCTGATCGCAGGCTTTGTGATTCCTTGGATGTTGTCTCTCAGAACCTTCCTGTGCCT
CTTCGCTCCTCCTTTGCCCAGTCCCTTTCCTCCTTTCCCTCTTCCTGACATTTGGAACTTCTTTCTCGATTGGAGTTTAGATTGATATGATGAT
TTTGACTGTGACGATGGAGATTGAGATTTGTGTTTATAAAGGAAGACGAAGTGAACCGCAGCCGTTGGATTAGTGTTTTTATTGTACGGATATG
GATGACGATCCGAGAGAATGTTTAAGCGTCACAAGAGACCAACGTCATCATTCGTATGTGGCTAGTAATGGGCCTATATGGATACTCCCTCTTT
TATCAGCAGAGGCAGCTTCACGTTAAAGGTTTCCTGGTGGAACTTGGTCTTCAGAGCTCTCTCTCTCTTCTTTGCCGCAGCTCGAGCTCTCCCT
CTCTCTCTTCTGTGTTTTGGCTCTCTTGTCTCAAGCTCACACATGCTTAGCTCACTCTCTCGAG |
Primers for UN19378 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
TTTCCTGGTGGAACTTGGTC |
59.943 |
20 |
GCATGTGTGAGCTTGAGACAA |
60.048 |
21 |
111 |
782 |
892 |
2 |
TTTCCTGGTGGAACTTGGTC |
59.943 |
20 |
TGAGCTTGAGACAAGAGAGCC |
59.883 |
21 |
104 |
782 |
885 |
3 |
GCAGCCGTTGGATTAGTGTT |
60.14 |
20 |
GCATGTGTGAGCTTGAGACAA |
60.048 |
21 |
271 |
622 |
892 |
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