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Simple sequence repeat (SSR)
>UN19544
GGGTCGATCAAACGACGTTTTATCTCTCCATCTCCACTATAATCGATCTGTAGAGTAATCAATTGTCCAACGACTCCCTACTTCAGGGGAGCAA
ATTGATTGAGGGGGAGAGAGCGTACGAATCGGAGATGTCGAACGGTACGGATCAGTCGCGGAAGCGTGCGGCGCCGGAAGACAACAATTGGTTG
CCTCCTGGTTGGAGAGTTGAAGACAAAGTTCGAACCTCCGGTGCTACTGCTGGTTCCGTTGATAAGTACTATTATGAACCAATCACAGGATGTA
AGTTTCGATCCAGGACCGAAGTGCTCTACTACTTGGAACATGGGATTTCTAAGAAAGGAAGCAAGAAACCAGACAAAGCTGATTCCAATTCAGA
CCATTTAGAAGGGCAAGGAAGCAATGAATCCAGCAGAAAATCTAAAGAGTAGCCTCCTCCTCCTCCGCCTCGGCCACCATCGCCGCCATTGAAG
TTTGATTTTTGAGAATCCGCCTGAGAAGGTAAGCTGGTCTGTGGCAAAAGCAGGAGAGGAAGCTTGGACACCTTTTGTTAGGGATGACAAGGTT
CAAGATTCGTTGAGACGAGAATGGTGCACTGCGTTTAACGTTATCACGACCAAGAACCCAACTAAACTGTCGTCGTTGAGACGACGATGATGAT
GATGATAGGCAAGCTGATTTCAGATAACCGTCTATCTCCAAAATCATGGTGTGCTGTTGGGAGATATGCACATATGCTTTCTGGTCACGAGTAC
AATTATTTTCTATTTCCCTCTTTTTCTTATTAGTCATATCTACGTTAACAAATCGAACCCAAGACTGTCCCTTCTCATTTGTATTTATGTTTCC
ATGTAGCGGTTTAGTAGAGGCCAGTATATCCATCTTCTAGGCTGGGAAAAGACGGGGACAAGCTGAAAGCTGAAGTGAAGAAACATGTTCCTCT
TTTAGCTCGAGATTTTGCTTTGCTTTGCTTTACTTTATACTGTTTCTAACTATCGTTTTTGAGTACAGCATAAGGGATGAAAAGCTAGATGGAC
ATGCAGGTATATATGAGCAAGTTTTCCAGTGATATATTCCAGAGGACGGATGAGGACGTGACACAAACCATGAACAAATAAATCATTTGTCCTT
TTGACAGACAATTTAGTTTCTCGGGTGGTTTTGGGTGTGCCGTTCGGAGTAGAGAATGATAATGTTACAAACGGGAGAGTCGTTAGGAGTACAA
AAGAGGACGAGAAGGAAAATTACTCTGAAATCTAAGCTAAATGGTACTATCTTTTTCAAGTACCAAAATATAATTTGAAAGTAGTAGAAATATT
GTATACACTCTGATCTAATAAAATTTAGCTATTATCCC |
Primers for UN19544 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
TTGATTTTTGAGAATCCGCC |
60.016 |
20 |
TATCTCCCAACAGCACACCA |
60.112 |
20 |
253 |
472 |
724 |
| 2 |
CCGCCATTGAAGTTTGATTT |
59.938 |
20 |
TATCTCCCAACAGCACACCA |
60.112 |
20 |
266 |
459 |
724 |
| 3 |
ATCACGACCAAGAACCCAAC |
59.827 |
20 |
TATCTCCCAACAGCACACCA |
60.112 |
20 |
118 |
607 |
724 |
|
|
