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Simple sequence repeat (SSR)
>UN19624
GGAGGGAGATGTGAGCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCGTCCGCTCCCCAAGAAGACGAAAGAGAAAACCTTTTTTACTCTCTCTC
TATAAATATATATAGATGATGGCACTTTCTCTCCTATCTCCAAATCATTCCCCTGCCTCTCTTTCTCCCTTCACTCTCTCCTCCTCCTTTCCCG
CTCCTAAAAATGCCTCCTTTCTCTCCTCTCTCTGCTCTTTATATCATCCCAAAGGAACCCTCGGAAGCAGCAGAACCGCGACCTCGTTTTTCGG
CGGCTCGGCCAACTTAAGAATCGATTCCATGGCGGAAAAGAGGCAAGCAGGTCTCATCATGGTTTCTAGAAACGGAGGTTTGGATGATTTGGAT
GAAGGTGAAATCGAGAGAATCGGTGGTCAAGACGAAGATGATGATGAGGAAGAAGAAGGACATCCTCATTCACCTTCTTCCCCTGATAGATGGG
ATGTTTTGGGCCTCGGCCAAGCCATGGTAGATTTCTCTGGGGTTGTGGATGATGGGTTCCTAAAGAAACTAGGCTTAGAAAAGGGAACGAGGAA
GCTGATCAATCACGAGGAGAGGGGTAAAGTCTTACAGGCAATGGATGGTTGCAGCTATAAGGCCGCTGCTGGTGGTTCTTTGTCCAACACTCTT
GTCGCTCTCGCTAGACTAGGCTGTCCTTCCATCACTGACCGCCCTTTGAATGTCGCTATGGCTGGCAGTATCGCTGGTGATCCTCTCGGTAGCT
TTTACAGGACTAAACTACGTAGAGCTAATGTAAATTTTCTATCTGATCCAATCATGGATGGAACAACTGGAACAGTGATAGTTCTCACCACTCC
TGATGCTCAACGTACTATGCTTGCCTATCAGGGAACATCTTCAGTCGTTAATTATGATTCTTGCTTGGCTAGTTTGATATCCAAGACAAACGTC
TTTGTTGTGGAAGGCTATCTGTTTGAGCTTCCTGATACTATAAGAACCATAACTAAAGCCTGCGAAGAAGCCCACAGAAATGGAGCACTTGTTG
CTGTCACTGCATCAGATGTCTCTTGCATAGAGAGGCATTACGATGATTTCTGGGACATAGTAGGCAACTATGCGGATATTATATTTGCAAACAG
CGATGAAGCAAGAGCGTTCTGTCACTTCTCCGCAGACGAAAGCCCGATCTCAGCGACAAGGTACTTGAGCCACTTTGTCCCGTTTGTTTCGGTG
ACAGACGGAATCAACGGGTCATACATTGGAGTCAAAGGAGAGGCCATATACATTCCTCCATCCCCGTGCGTGCCGGTCGACACGTGCGGTGCTG
GAGATGCGTACGCTTCGTGGATATTATACGGTATCTTGAGAGGTGTCACCGACTTGAAAGGAATGGGAGACTTGGCTGCTACGATTGCAGCCAC
TGTGGTGGGTCAGCAAGGAACCAGGCTTAGGGTTCAAGACGCGGTTAGGCTGGCTCGGTCGCATGAGTTCCTTCTCAACAGTTCTGGTGTTCGA
ACTGATGTTGGGTCTTCTTGATCCAAAATCATTCTCTCTCTCTCTCTCTAAGCTTTTGAATGATTCTTTGTTTCTTATGTAGTAGCGACTTGTA
AGCATCTCTTCTTCATTTAGTGGATACATTTGGAATATTTGTTGTATGTAACATTTTTTTTTTGTCTGTAACATTTTTTGTATGTATGCCCTCG
TCTAAATACGCAAGTGTTTCCAACTT |
Primers for UN19624 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
CAGGCTTAGGGTTCAAGACG |
59.869 |
20 |
TTGCGTATTTAGACGAGGGC |
60.23 |
20 |
274 |
1432 |
1705 |
| 2 |
GGTCGCATGAGTTCCTTCTC |
59.81 |
20 |
TTGCGTATTTAGACGAGGGC |
60.23 |
20 |
239 |
1467 |
1705 |
| 3 |
TCGCATGAGTTCCTTCTCAA |
59.522 |
20 |
TTGCGTATTTAGACGAGGGC |
60.23 |
20 |
237 |
1469 |
1705 |
|
|
