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Simple sequence repeat (SSR)
>UN19667
GGAGATTCTCTCAGATTCCATGGAAGCTCCCAAAAGCTGATCCCTGTAATCAATTTGTTTCCTTCGTCTCTCAGATTCCGATCCGTGCTCCTTA
CATTGGACCTGCCTGATGGTATGCAGCAGCAGTCTCATAAGGAGGAGTCTCATTGTTCAGGCTGGTCGTATCGGGGTGTTTGCTCAGGGAAGAC
ATCAGCAGCTTCACCGAATTAACAAGACCTTGAGTGTTGGTTTCGGGTTTAGAACAACCACTGCTGCAAAGATGATGATGGTTGATTCTTCTTC
TTCTTCTTCTTCTGCTGGGGAGAAACGAGTTGGGATGGTTGATATGCCTCCTGGGAAAGTTGATGACGGCGGATACATTGGTGGTGGCTGGAAA
AATGATGATGGAAGCTTGAGCTGTGGGTACTGCAGTTTCAGAGGGAAAAGGTCTACGATGGAAGACTTCTACGATGTCAAAGCTTTTAAGATGG
AAGGCCAAACAGTTTGCATGTTTGGAATTTTTGATGGTCATGGTGGTTCACGTGCTGCTGAGTACCTGAAGAAACACCTCTTTAGCAATCTTAT
GACGCATCCACAATTTTTGACAGACACCAAGCTGGCATTAAGTGAGACATACAAACAAACTGATGTAGCATTCCTCGAGTCGGAAAAGGATACT
TACAGAGATGATGGCTCCACAGCATCTGCTGCTGTGTTGGTGGGGAACCATTTGTATGTTGCAAATGTTGGAGACTCACGGACAATAGTTTCTA
AAGCTGGGAAAGCGATCGCGCTATCAGATGACCATAAGCCAAATAGAAGCGATGAAAGAAAGAGAATTGAAAGCTCTGGCGGTGTTATCATGTG
GGCAGGAACTTGGAGGGTAGGTGGAGTACTGGCAATGTCCAGGGCCTTTGGAAACAGAATGCTGAAGCAATTCGTTATTGCTGAACCCGAGATT
CAAGATCTAGAGATTGATCACGAGGACGAGTTTCTTGTTCTCGCAAGTGACGGTTTATGGGATGTAGTACCAAATGAGGATGCTGTATCCCTTG
CTCAAAGTGAGGAGGAGCCTGAGGCAGCTGCCCGCAAGTTAACCGACACTGCCTTTGCTCGTGGCAGCGCAGACAACATCACTTGCATTGTTGT
TAAATTCCGTCATGATAAGACCGAATCCCAACCAAACCCCGAGGCTGAACCAGAAGATGATATCCAAACCGAATCATCGAACCCCAATGATGAA
ACGGAAACCGAATCAAGCCCCAAACCTGAAGCGGAACCGGTTACCGAGGCTATACCGGAACCAAAACCGGAACCGAACCAGAGATCAAAGGTGA
GAAAGCGGGTGAGTAATGTGGTCAGCCAGCGGGAGGTAGAGAGAGATGTTTTTGGGGTCGAAATTGAGGCATGTGCAGACAGACAGATAAAATA
TTAAAATTGATTTAGTAGTTTGTGTGCTTTGTGGCTACCTGTAACGTGTGAGGATTTTAATTATTTTTGGTTTTGTGTTGCATATGGCACATGC
CTGCCTGTCTGCCATAAGGACGGCGCCGCTTTGAACCTGTCCTCGATTTTTGTCTATTCATTTCGCTCTATTCTGTTTGGTTGGTGCTTTCTCA
CACCAAAAAAAAAGAGCACACCATTTGTTGTGTTCCTCTCACTTTATTTATATCTTATCATTCAATAAACAATGTTTTGTATTTCCTTTC |
Primers for UN19667 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
CTTGAGTGTTGGTTTCGGGT |
60.005 |
20 |
CTTTCCCAGGAGGCATATCA |
60.029 |
20 |
125 |
217 |
341 |
| 2 |
ACCTTGAGTGTTGGTTTCGG |
60.005 |
20 |
CTTTCCCAGGAGGCATATCA |
60.029 |
20 |
127 |
215 |
341 |
| 3 |
CTTGAGTGTTGGTTTCGGGT |
60.005 |
20 |
GTATCCGCCGTCATCAACTT |
59.962 |
20 |
142 |
217 |
358 |
|
|
