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Simple sequence repeat (SSR)
>UN20038
GGAAAACAGGTAGTCGGCCCAATACCAAAAATCCCAACCCACCGGCTTGTCCAAAAAAACCTTCTCTACTACTTTTACCCTACTTGTCCGATCG
AATTCTACTCAGCTTCGCCTTCGATTTTTGTCCGTGAGTAGCTTAATCTTCCAATCGGTGTTGGTTTCTTCTTCTTCTGGTCGTCATGGCTTCA
GATGCTGATATGGAGGACTATGGATTCGAGTATTCCGATGACGAACAGGAGGAACAAGACGTTGACATTGAGAATCAGTATTACAGCGCCAAAG
GTATGGTTGAGACCGAGCCTGAAGCTGCACTTTCTGAGTTTGCTGAGGTTGTTAAGATGGAACCAGACAAGGCCGAGTGGGGTTTCAAAGCGCT
TAAGCAGACGGTGAAGATTTACTATCGACTTGGTAAATACAAAGAGATGATGGATGCATACAGAGAGATGCTTACCTATATCAAGTCGGCAGTG
ACCAGGAACTACAGCGAGAAATGTATAAACAATATCATGGACTTCGTCTCTGGATCTGCTAGCCAGAACACTGGCCTGCTTCAAGAGTTTTACC
AGACCACCTTGAAAGCCCTTGAAGAGGCTAAGAACGAGAGACTCTGGTTCAAGACGAATCTTAAGCTCTGCAACATCTGGTTTGACATTGGTGA
ATACAGACGAATGACTAAGATCCTGAAGGAACTGCATAAATCTTGTCAAAAGGAAGATGGAACTGATGATCAAAAGAAAGGAAGTCAGCTGCTT
GAGGTTTATGCGATTGAAATTCAGATCTACACTGAAACAAAGGACAACAAAAAGCTTAAGCAACTATACCAGAAAGCACTTGCTATCAAATCTG
CTATACCTCATCCTAGGATCATGGGCATAATCCGCGAGTGTGGTGGCAAAATGCACATGGCAGAACGTCAGTGGGCAGAAGCGGCTACAGACTT
CTTTGAGGCTTTCAAAAATTATGATGAAGCTGGCAACCAAAGGCGTATTCAGTGCTTAAAGTATCTTGTTCTTGCAAATATGCTGATGGAATCA
GAAGTGAACCCATTTGACGGTCAAGAGGCAAAGCCGTACAAAAACGACCCTGAGATCTTGGCAATGACGAATCTGATAGCAGCATATCAACGAA
ACGAAATTATAGAGTTTGAGAAAATACTTAAGAATAACCGGAGGACGATAATGGATGATCCATTCATCAGAAACTACATGGAAGATCTGCTGAA
GAAGGTGAGAACTCAGGTGTTGCTGAAGCTGATAAAGCCGTACACGAAGATCAAGATTCCCTTTATATCAAAGGAGCTGAACGTGCCGGAGAAG
GATGTGACGGAGTTGCTGGTGTCGCTGATTCTTGACAGCCGAATCGATGGGCACATTGATGAAATCAACCGTTACTTGCTGAGAGGTGACAGTG
CTAATGGAAGGAAGCTTCACAAGGCGGTTGATAAATGGAACACACAACTCAAGTCTTTGTCTATGAGTATCACCAACCGAGTTTGTTAATTTCC
CTCCACCTCTCTCTCTCTCTCTCTCTTGGATAATTGTCACGGTTTAACTTTTTTTCTGGTTTGGTGGATTATTGTTTGATCCAAAAACGGTCGA
TTTGCTGGAAGTGTTTGTTGGAATCAGACAATGAATTTGTATGGAGATTTATGAGAAATCATCATAAAAATGAGTTAAATG |
Primers for UN20038 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
CTGGTGTCGCTGATTCTTGA |
59.984 |
20 |
CAAATCGACCGTTTTTGGAT |
59.801 |
20 |
271 |
1332 |
1602 |
| 2 |
TGTCGCTGATTCTTGACAGC |
60.144 |
20 |
ACACTTCCAGCAAATCGACC |
60.119 |
20 |
277 |
1336 |
1612 |
| 3 |
TGGTGTCGCTGATTCTTGAC |
59.837 |
20 |
ACACTTCCAGCAAATCGACC |
60.119 |
20 |
280 |
1333 |
1612 |
|
|
