 |
Simple sequence repeat (SSR)
>UN20050
GTAAGGGATGCAATATCAGGACAAATCTTGGTGATAAGGTCAAGTTTAGGTGGGGAAGTAGATGGACTAGGAGGAGGAGGAGGAGTTGGTATAA
GTAGGTTAAGGAACGTTGATCAACAGGTAAGGCAACAGAGAGCGTTGCAGAGGTTAGGCGTGATGCAACCACCTCACGCTTGGAGGCCTCAACG
CGGCCTACCTGATTCCTCTGTTTTGATACTCCGTGCTTGGCTCTTTGAGCATTTCCTCCACCCTTATCCAAAGGATTCGGACAAGATCATGCTA
GCTAGACAAACAGGGTTGAGCAGAGGCCAGGTGTCGAACTGGTTTATAAACGCACGTGTGCGTCTCTGGAAACCGATGGTGGAGGAGATGTACA
AGGAAGAGTTCACAGACGCATTGGAGGAGAATGCTACCACCTTGTCTTCTGGAAACAACAGACCTGAAACCACCGAGTCTCAAGAACAGCATCA
GCTCGTGTCTAGTTCCAGCAACGGTGGTGGTGACGACCGGTTCATGATGGTCACCGAAATGACAAGAAATGGTAGTGGTGGGATGTCTTTAACA
TTAGGCATTCCGGACACACGCGGCAACGACGTACCTATGTCCGGCGACAGCTACGAGAACAGCATCCAGGGAACCAGTTTCCAGTATTTAAACT
CAGGCAACGGCCAGCACCGACTTGGCTCGGCACAATTCTTGCAGGATTTTGTAGCTTGATGAAAAATACAATAGAGAGGGTGTAGTAATAATTA
TATTCTTTTTGTGAAAGTAAACCATCAGATGGAATTAACGAGGACAACTAGCATATCATAAGGCCAAAGGTTTTCACATCAAAAGAACAATAGA
AGCTCACTACTTAATGAAACAAAACCACAAGCACGTCCAAAAGATTCAACAATCTTTCACAAAAACCAAAAGGACCCTACCCGAAGTTATCTTA
TTGACAGGTTTCTAAAACATAAGCATGTCCAAAGCCACAAGAACAAGTTTCCATCAGTAAATTTTCTTCGGTTTACCTTTTGTAGAGAACTCTT
ATATCTTCTCGTAAGGCAGGACTTTCAAGGAACAGATCACCAGCATCATCCACATCGATTGTCTCTACCTCAAAGTTACGGTATCCACAGTACT
CATTCCACTCGAACCACATCTTTGAGATGACTTCCTTTTTGAAGCAAGTGTTGTGATCCTCTTCCTCAGGTGATGACCCAGCGATCAATCTGTA
CGCATGCACTTTCTTCGTCTGTCCTGGTCTAAAAGCTCTCCCTATCGCTTGGCGTGTCACTGAAGGGTTTAGAGGAACATCCAGAATCAGTATC
CGAGATGCTCCAACTAGAGAGATACCTTCTCCACAGGCCCTTATCGAACCGAAGAACACTTTGGCGTCTGGCGAATTGTTGAACCTTTCCATAG
ACAACTCACGCTGCTCAGAGCTGGATTCTCCTGTGAGAACAAAGACTTCTTTCCCTAGCTTCCATCCTTTAGCTAGAGCAGCTAGTCTTTCAAG
AAACTTCAGAGGCACGAGATACTGGCTGAAAACCAAGAGCTTCTCCCCTGCTGAGTCACACAGGTCTATCAAGTTTAGGAAGAACTTTGCTTTC
ACGCCTTCATCCACATCTAGCTTCTCTAGCATTTCGTCCATAGTTGAATCAGATACACTATCAGTCTTACTATCAGTCTTTTCAGAGAAAGCGT
TCAGCCTCGGATGAAGGTAAATTGCACTCCCCACAGCCGAAACCTTGAATTTTCTCTTCTCACGCCTCAACTTCTTCACTTCAGTCAACTGCCT
TGGAGACAGATTGAGAACCACAGTGAAATCATCAAGCCCAGGAAGCTCATCTAAGAAGTCTCCTTTGTAGTAGTGAAGCACCTTCTTTGTCATC
TCCCTCAAATCCTGGATCATGTTAATTTTCATCTTGAAATCCTCGCACTTCTGCAGCGTGTGCTCCACAATTTCGTTGAAAGCCGAAGACACGT
CTGAATTGCCTCCCAGATGAGACCTGACAGCGGAGATAGGGGTACGACTCAGGATCCTTTTAACAATAGACTTGGAGGTGTCCAACTTGAGGAA
CTTTGGTCGAACGAGGTTCAGAATGTTGAAAACCTCCTTCACGTGGTTCTGATAAAGCGTTCCTGAGAGGACAACTTTCCTTGGTGTTTGGACT
TGGGCAAGGGACTGCAATACATTTGTGTCCTCGTTTCTTGGAGTGTGTCCTTCATCCAAAATGAGGATCGAAGGTACTTTCAGCAATATCTCCT
GGCAAGAATGTGAGTAGGTACTTGTATCGTCACAGACAATGGTCGAGAACTGCTTGTAGCCCAGAAACAAAATACTCTTCTTCTCCATCCACTG
TTTCAAAATGGACAGC |
Primers for UN20050 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
GGTCAAGTTTAGGTGGGGAA |
58.884 |
20 |
AAAGAGCCAAGCACGGAGTA |
60.015 |
20 |
197 |
38 |
234 |
| 2 |
GGTCAAGTTTAGGTGGGGAA |
58.884 |
20 |
AGGAAATGCTCAAAGAGCCA |
59.955 |
20 |
208 |
38 |
245 |
| 3 |
GGTCAAGTTTAGGTGGGGAAG |
59.85 |
21 |
AAAGAGCCAAGCACGGAGTA |
60.015 |
20 |
197 |
38 |
234 |
|
|
