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Simple sequence repeat (SSR)
>UN20056
GGAGAAAGAGAGAGAAAGAAGAAAAGTCTCTCTTTTTTTTTTCTTCGTCTCCCAGATTCTCTCCTCCTCCTGCGAGATCAAATCTTCTTTCTCT
CTCACCTTCCTTGGTTTTCTCGGCGGCTCCATCTCTTTTTTTTCTTCTTTTCTCAGAATCGTTTGTTTCCATTTTTCTTGGGATAAATCTTTCT
CCCTTCTGCAGAGGCCATGTCGGACAAAGGTCGTCCCTTGCCGAAGTTTGGTGAATGGGATGTGAATGATCCAGCATCTGCTGAAGGTTTCACA
GTGATATTCAACAAAGCTAGGGATGAGAAAAAGACTGGTGGCAAACCCGGATCGCCCGGTAAATCTACTGATGGTCATGCTAAGTCCGGAGGAG
GAGGAGGAGATCCTAGTAAACCTCAGCCTAAAAAGTGGCTCTGCTGCATGCAGTCTCCGGCTGTGGACTCTTGATTGACACTAAAAGATGGATT
TGTTTGCTGCGCAAAGAAAAAAAGAGAGAGTCACATTGCTTAGACATCTAAAAGCAATGTTCCCTTCTTTTTTTATGTTTTATTGTCTTTCTTG
AAGTACCGACGACAACAAAAGGTTACTAAGATAAGTTGGAGCCACCCCCCTTTAGTATCACGATTATGATTCCTTCTTTGAAGTTGTTTCTTCT
TCTATGAAAAAAATGTTGTAAAATCGTGTTGTCACTTTTATTGGAAAAGAAAAAGAAAACATAGTAGTTATTGTGTATTTAACTCATGGGTCGT
TTTTGGGTTTAGCTTTATGGTGTTTTTTTTTCCTTTATTTTAAATTATATTCTGTTCTTCGACCCAAAAAAAGTTATAATGTATACTGTGTATG
GATGTTGATCCTTGTGTTTTACCTTTTACTCATCAGACAAGTTATTATTACGTGTT |
Primers for UN20056 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
CTTGCCGAAGTTTGGTGAAT |
60.11 |
20 |
ATGCAGCAGAGCCACTTTTT |
60.022 |
20 |
201 |
225 |
425 |
2 |
TGGTGAATGGGATGTGAATG |
60.177 |
20 |
ATGCAGCAGAGCCACTTTTT |
60.022 |
20 |
189 |
237 |
425 |
3 |
CGAAGTTTGGTGAATGGGAT |
59.79 |
20 |
ATGCAGCAGAGCCACTTTTT |
60.022 |
20 |
196 |
230 |
425 |
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