 |
Simple sequence repeat (SSR)
>UN20131
GGATGGCAGGAACGTCATCTATTTCTTTCTTCCACAAACCCACCTGCAGTTTCAATTTGGGTCCTTCCTCTGCTCCCGCTCGAGCTCAATATCG
AAGTTGGAGTTCAATCTTGCCTTTCAATCGGAGGAGATTCAACTCCCCTAAAACTAAAACTATGACTATGGCCGATTTAGTCAAAACCCACGCT
TGGAGAGACGGCGACGGGGAAGAACGGTTTCAGGCGTTGGAGCAAGAGGCTTTTATGAATAATCCCTCCAACGATTTGGTCTCAGGGATCAACG
CCGTCGCTAATCGTCTGAGTAAATGGGTTGTCGCTGCTCTGTTTGGATCGGTTCTGCTTCTACGACATGATGGTGCAGCCTTGTGGGCTGTCAT
TGGCTCCGTTTCCAATTCCGCACTCTCCGTAGCTCTCAAGCGCATCCTTAACCAAGAGAGACCTGTTGCAGCACTTCGTTCTGACCCTGGCATG
CCTTCTTCTCATGCTCAATCCATTTCTTTCATCTCTGCCTTTACCCTCTTCTCTCCCATTGAGTGGCTTGGAACCAATGAACTCTCTCTTTTCC
TCACCACCCTCATCCTCGCTTTGGCTTCTTACTTCGTAAGTTTTCATATCTAGCATTAACCATATAAACGAAAAATCATTCCCTTACATAATAA
CTGGTCATGATTTTTTATTTTATTTTTATGCAGACATGGTTAAGGGTTTCCCAGAAGCTTCACACGCCCAGTCAAGTGGTGGTAGGTGCAATCG
TGGGCTCTCTTTACTCCACCTTGTGGTACATTACCTGGAACTCACTTGTTCTCCAAGCTTTTGCCTCATCATTCTCCGTACAAATAGCTGTCTT
TACAGCTGCTGCTGCATCTGCTCTAGGTTTTGCAGTTTATGTGCTACTTAACTGGTTCAAAGATGACAGATAGACAAAGAAAATATAGTTAGAG
GGTTGGGTTGTAAAACTATTCCTTTTGTTTCCCATTTCACTCGATACTGTTTGAACTGTATAGCAATCAATATTACCACACTTGTGTTCTGTTT
CTTGACACAAAACAGTAACTTTTTAAATATAGTATACAGTGTTTAAGATGACAACTGAAGCGTGAAAACTAACAAGCATTTTCCATACAGAAGC
AGTGCTGTATTTTAGCATATGAAAGCCGAAGGTCAGCCTCAATGCGAGAAATGTCTGATCCAACAAATTTTATTATAGAAAACAATCAGAAGAA
AAGGTTCCAACTTTTTTTTTCTTTCATGTTACAAGAAAACTTTATTGGAGAAGCAGGAAATGAATTTCTGGTCTTCGTAAAGAGTAGTCTCAAG
CTGCTTTGGGTAGTAGATCACTGAGTACTGAATCATATTCTGCATCCCGTGCGTTCTTCTTGTAAAGGAGCTTCTTGAAATCAGTGTCGTCCAA
GTTCTTTGAGTTTTGTGCAGCGTGAACTTGAGCTAAGTTGGAATAATCCGCAGCCGAAGTAGAGAAGAAGGCCCTTTCTTCTTCAGTCACCTTC
CTCAGAAATCTAGCTGGATTCCCTCCCCAAACCTCGCCGGAGGGAATTCGAGTGTTCTGCCTAACAAGAGCTCCAGACTCAACGATGGCATGCT
TCTCAACATGAGCGCCATCCAAGACGGTTGCACTAGCACCAATGTAAGACTCGTCTTCGAGAGTGCAGCCATGTAAAACAGCACTGTTACCAAT
AGTGACATAGTCACCAATGAGAGTAGGCAAGACCTTGCCGTTTAAGTTGGACTTGGCAACGTGGACAAGGGAGTTGTCTTGGATATTGGTCCCA
GCTCCGACAGTGATGGTGTTAGCATCTCCTCGCAAGACACATCCATACCAAATGGAAGAGGCTGGTCCGAGATGGACATTGCCAATGAGAGAAG
CGCTAGGAGCAACGAAAGCGTCCTTATCGACGATAGGGGCCTTGTCAAAAACATTCATAAGGGTGCGGTGCCTGGAGAGCTGCTCACGGAAGTG
ATTTTTGCCTTGGAGGCGACAACCGAGACGATCAAGTGCTTGACCAGTTTCCCGGATCCAGAATCCCACGCTGTACAATGCTCTCCCCATACTT
GCCATCGATGATTTTGAGGGTTTTCGCCGGAGAGGAACTTATGAGGAGGAGGAGGAGTATTAGTCTTTTTCACGGTTTCCTCCTTGGTTTAGTC
CTCAAAATGCCGGTTAGTA |
Primers for UN20131 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
AGCTGCTCACGGAAGTGATT |
60.02 |
20 |
CAAGGAGGAAACCGTGAAAA |
60.081 |
20 |
197 |
1958 |
2154 |
| 2 |
CACGGAAGTGATTTTTGCCT |
60.11 |
20 |
CAAGGAGGAAACCGTGAAAA |
60.081 |
20 |
190 |
1965 |
2154 |
| 3 |
AACCGAGACGATCAAGTGCT |
59.874 |
20 |
CAAGGAGGAAACCGTGAAAA |
60.081 |
20 |
160 |
1995 |
2154 |
|
|
