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Simple sequence repeat (SSR)
>UN20140
GGAGAGGAATCCATTTCCTGTTTAGATTCCGAGTGACGCCTCTCTCTCTCTCTCTCTCCCCTCTTCTCGATTCGTTTCTTTGCCGGAGCTCGCA
GTTTGGTGGAGAAAGATGGCTCCCAACGATCCTAAAAACGGTGGCGGCGGTTTCTTCGCTTCTCTTGCTTCCTCAATCTCCAATTTGGGATCGG
CCATGACCAAATCAGTTAACGGTTTGGTTGGCTATGAGGGACTTGAAGTTATTAACCCTGAAGGAAGTACAGAAGATGCAGCCGAGGAAGCAAA
CAGAGGAAGATGGAAGCAAGAGGATCGAGATGGTTATTGGAAGATGATGCAGAAGTACATAGGATCTGATGTCACATCAATGGTTACCCTTCCC
GTGATTATCTTTGAACCTATGACAATGCTCCAGAAAATGGCTGAGTTGATGGAATACTCGCATCTATTAGACATGGCAGACCAAACTGAGGACC
CTTATATGCGCATGGTGTATGCGTCATCATGGGCTATCTCTGTGTACTATGCTTTCCAACGTACTTGGAAACCGTTTAATCCAATCCTCGGAGA
GACTTATGAGATGGCTAATTACAATGGTGTTAACTTCATATCTGAACAGGTCAGTCATCACCCGCCAATGAGCGCTGGCCATGCTGAAAATGAG
CATTTCACTTATGATTGTACATCAAAACTGAAAACAAAGTTTCTGGGCAATTCCATTGACGTTTACCCAGTAGGAAGGACACGAGTGACACTTA
AAAGAGATGGAGTGGTTCTTGACTTGGTACCTCCTCTGACCAAAGTTCACAACCTAATCTTTGGACGAACTTGGGTGGATTCTCCTGGAGAAAT
GATCATGACCAACCTGACCACTGGTGACAAAGTCGTGCTTTACTTCCAACCATGCGGCTGGTTCGGATCTGGTCGATATGAAGTGGACGGATAT
GTCTATAACGCCTCTGAGGAGCCCAAGATACTCATGACTGGTAAATGGAACGAGTCGATGAGCTATCAGCAGTGTGACGGTGAAGGTGAACCTC
TCCCAGGCACCGAACTAAAGGAGGTCTGGAAACTCGCTGATGTTCCAAAAGATGACAAATACCAATACACACACTTTGCTCACAAGATCAACAG
CTTCGACACTGCCCCGAAAAAGCTGTTGCCGTCTGATTCACGGTTACGCCCTGACAGATACGCACTAGAGATGGGTGACGTGTCCAAATCCGGA
TATGAGAAGAGCAGCATGGAAGAGAGACAGAGAGCTGAAAAGAGAACCCGCGAAGAGAAAGGCCAAAGCTTTACTCCCAAGTGGTTTGATATAA
CCGAAGAAGTCACTCCTACACCATGGGGGGATCTCGAAGTTTACCAGTTCAACGGAAAGTACTCAGAACACCGGGAAGCTGCGGATAGCTCTGA
AGATAATACGGACGACCCTAAGTCAATCACATTCAACCCATGGCAGCTTCAAGATTTGTCTACCTAATGAATCGCTCCAAAAGATAAGAAAAAA
AAAAGATCAAAATCTTTTGGTAACAGATGTTGTAATTCTTATTCTCAGCTTTCTTTACTTTCTCTAGTAGTAGTTTTACAAACTTTTATTGTTC
TTTTATATTTAAATCAAATCTCTCTTTCATTCTCGTTGCCATAGCCATCTTCTTCTTCTTCTTCTTGGGGCATGATCAAACCCTCACCAAACCA
TCTTGGAGGATCGTATCCAGACCCACCAAAAGGATTGCAGCGGCAGAGACGCCATGTGGTGAGAACAGTGCCTTTGAGAACTCCATATCTTTTG
TAAGCTTCCATAGAGTACTCACTGCAAGTTGGAACGTAACGGCGGCTTCTAGGTAACACCGGCGATATCTCCCTCTTGTAGAATCTCAGCATTG
CTAAAGCTACTTTGACTCCCACACTCTCCTGCTCTTCCCCATCTTTAGGAGATTCAGGGTCTGGACTCGAAGGCGTTGATTTCGCGGATAAGCA
ACGGAGCTGATGCTTGTTCGTATGAGAAAGATGATGAAAGCTCAAGCGAGACGTACTGAATTTCAAGTGAATTTTAGGAGGATTAGGGTTTTCA
GAGATTAAGTGGGTTGCATAAGGACGATGAACGGAGACGACGACGACCGCCATCAAATGCAAAACTCATACAAACAAAGCTTTTACTTTGAACC
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Primers for UN20140 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
CCATGGCAGCTTCAAGATTT |
60.214 |
20 |
TGGGTCTGGATACGATCCTC |
59.886 |
20 |
270 |
1448 |
1717 |
| 2 |
CCATGGCAGCTTCAAGATTT |
60.214 |
20 |
GGTCTGGATACGATCCTCCA |
59.886 |
20 |
268 |
1448 |
1715 |
| 3 |
CCATGGCAGCTTCAAGATTT |
60.214 |
20 |
CAAGATGGTTTGGTGAGGGT |
59.82 |
20 |
250 |
1448 |
1697 |
|
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