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Simple sequence repeat (SSR)
>UN20228
GGTCCAGAAAAGATTCTTGTCGTTTTTACATTATAATAATATAAAGATTTTTTTTTGGTTTCTTTGGGTTTAGAAGAAATGAACAGATGCACAA
GCAAGCAAAGAAGAAACGATAGTAAACATTAGTTTCCCACATGTTTCACTCCGTACCCATCAACTACTTGGTTTCTGTATGTACAGAGAGATAC
AATAACAAACACCTTCTCTTAATCATGGCTCAAGTTTCATCTGTAGTGTTGGCTCAGAACAACTGTTGTTGTTATTGCTCTGTTGCTGGACATC
TCCAAACCCCATCTGAACAACGCTTTGCAGATCATTTTCCCAGAATCCTTGTGTCTCAGCTTGAACAAATCCATCGCTGGAAGGGAAATGTGTG
TCTGAAAATCTAGGCATGTTCTTGGCAAGAGAATAGTATCCAGATGGAATTCTTTGCTCTGAGCAAGCCATTGCGTAAAGAGACTGCGTTAATG
ACTCTCCCGGTTGAATCATCTCTGTGGATAAAGCAGCATTAGGGTTAAACTCCATCCTTGGATTTATAGTAGCCAGCTTCATTGACAAGAACTC
GACTTGTCTCTGCAAGGACTGCACATAGTTGATGATTTCATCAAGCATAACTGCTTTCCCAGTTATCCGGTTGCAACCAGGAACCAGATCCTGA
AGCAAAGTCATCCTCTCGCTGATCTTCTCTCTTCTTGCTCTTTCAGCGAGGCTGTGGCTATCAGTTGCCTGACCCCTTCTAGCCCTAACATGAA
TGTAATCTTTGGGGGGCTCAGGAGGCTTAGCATCATCCTTATTGTCTATTACGTTCTTGCTGCTTCCAGCTTCGTCCTGCTTGCTTCTCTTGGA
TCCAACAATCTCTCCTGAAACCTTAGAATTGGAAGCTGTAAGAGAGGAGGAAGCAGGAGAGTCCTTGCCATTACCTCCAGAAACAGAAACAGGG
ATCGACTTTCTCTTCCTGGAGTTTGGTTTCGGTGTCTGAACTCGATGATCCGAATGCCTTGGATCCAGCAAGGAGCTCTTGTTGCTGTCTTGTC
CTGTTAGCTGATCGGATCCGAACTGACCCCCCGGATAAGGAGGGAAGCGGATCTCTTGAGGAGGGTTGTTGCAGAATCTGCCGAGGAGATCGCC
GATGGTTCCTTCGTTGCCAAAGGGATCGCTCTGACCCAAAGGTAAGTACTTTATTCTTTCATTCTCCATCTTCTTCTTCTTCTTAATAGTTCTA
TCTTGTAATGAGATTCTGAATCAGAGAATAAGACAGGAAAGCTACTTCTACATGGGAAAGATATGAGATATTTTTTGAAACACAAGTAAGAAAG
GGACCACACTTTTGTTTCTGTGTGACTCTTCTTCTTCTTCTTCAGACAAATTATCAACTTATACCTCCGAGTAAAGATACTGAATTTCCCTGGA
AAAATGTAACCAATTTTGGGTTTTGTTTGCGTTAAAAAAACGGAAACGAGTCAAGAAAATTTGCAGAGGGTACAAGAAGGGAGGGAGCTAGCTA
TGGATGAATCC |
Primers for UN20228 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
CTCTTGAGGAGGGTTGTTGC |
59.844 |
20 |
CAGAAACAAAAGTGTGGTCCC |
59.482 |
21 |
250 |
1087 |
1336 |
2 |
ATCGCTCTGACCCAAAGGTA |
59.694 |
20 |
CAGAAACAAAAGTGTGGTCCC |
59.482 |
21 |
184 |
1153 |
1336 |
3 |
CGGATCTCTTGAGGAGGGTT |
60.586 |
20 |
CAGAAACAAAAGTGTGGTCCC |
59.482 |
21 |
255 |
1082 |
1336 |
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