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Simple sequence repeat (SSR)
>UN20234
GGGCACACGAATTTTCAAATCTCCTCCTCTCTCTCTCTCTCTCTCTGTTTTCCTCGTAGATCCCTCTGTTTCCCTTTCTGTCTTTCGAATCTGA
AGATCATGTGTGAGAACGCCATGTCAGGTCATCTCAAGAAACTAACGATCGACACAGGACGTTCAGAGACTCTCGTGGTCTGTTTCGGTGAAAT
GTTGATCGATTTTGTGCCAACGGTGGGAGGTGTTTCGCTCGCTGAAGCACCAGCTTTCAAGAAAGCTCCAGGAGGTGCACCTGCTAATGTTGCT
GTTGGTGTCTCTAGACTCGGTGGCTCCTCTGCTTTCATTGGAAAGGTTGGTGATGATGAGTTTGGAAAAATGTTAGCTGAGATTCTAAGGCTGA
ACAACGTGGACAACTCTGGGATGAGATTCGACCACAAAGCACGTACTGCTCTCGCCTTTGTTACGCTAAGAGCTGATGGAGAGAGGGAGTTTCT
GTTCTTCAGACACCCGAGTGCTGATATGCTTCTCACGGAGTCTGAGCTTGACAAGAACTTAATCCAAAAGGCCAAGATCTTTCATTACGGATCA
ATCAGTTTGATCAAGGAACCTTGCCGATCGACTCATCTCGCAGCCATGAAAATCGCTAAAGCCGCAGGGAGTCTCTTGTCGTATGACCCAAACT
TGAGGTTACCATTGTGGCCATCAGAGGAAGCTGCAAGGAAAGAGATCATGAGTATCTGGCATCTAGCTGATGTTATTAAGATCAGTGAGGATGA
GATTACATTCCTGACTGGTGGAGATGATCCTTACAGTGATGAAGTTGTGTTGCAAAAGCTGTTTCATCCAAACCTTAAGCTTCTTGTTGTTTCA
GAAGGACCTAATGGGTGTAGATACTACACTAAGGCGTTTAAAGGTAGAGTTGGTGGAGTGAAAGTGAAAGCGGTTGACACAACAGGTGCAGGAG
ATGCATTCGTGAGCGGTCTTTTGAACAGCTTAGCTTCTGATCTCACTCTTCTCACTGATGAGAAGAAGCTAAGAGAGGCGCTTCTATTCGCAAA
CGCTTGTGGAGCCATTACTGTAACAGAGAGAGGAGCGATTCCAGCGATGCCCACCATGGATGCTGTTCAAGAACTTGTCAAATCTTCTCGCTCC
TGAAAATGCTCATAAAGTCTCTTTTTGAGTGAACTCAGTTCCATTCCCTGTATCTTTCTTTGTTTGTTTTTTCTCTCTTTTTTCCCAATTTGTA
GGAACTCGAGAATGTTGTGTGTGTGTGTGTTGATCTTCTGGAGTTTTGATTTGGTTTTAAACTGCTTGTCGTTTATTGTTGCGGAGTAAGGATA
TTTTAGTTTTAAACTGCTTGCCGTTTCGTTTTC |
Primers for UN20234 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
TTCTCGCTCCTGAAAATGCT |
60.096 |
20 |
TCCGCAACAATAAACGACAA |
60.111 |
20 |
189 |
1119 |
1307 |
| 2 |
CTTCTCGCTCCTGAAAATGC |
60.096 |
20 |
TCCGCAACAATAAACGACAA |
60.111 |
20 |
190 |
1118 |
1307 |
| 3 |
CACCATGGATGCTGTTCAAG |
60.112 |
20 |
TCCGCAACAATAAACGACAA |
60.111 |
20 |
222 |
1086 |
1307 |
|
|
