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Simple sequence repeat (SSR)
>UN20383
GGGAAAACTATAAAAGATTAATACATATTGGTCTTTGCTTTGTATATAAACTAAAATAGAGAATAGAGTTAGAAAACTTGAGAGGAATGAAATA
GACATCTCATCATTGCAGTCTTGAGGAATTTACAACACTTTGACATAAAATGGATGATATTTTGAGCCACAAGGAGCACAAAGAGAGAGAGAGA
TAGGCATGTCTTAGATTCTTCTTTTGATTTTCCTTCATGAATGTTTCTCACTTTTCTTCCTTTGATTTAGCTGTTGCTCCCTAATATGTTTCTG
TATGTGTCTTTGACCTTCTGAAACATCACCTCTCTGTCTGGTTTGAAGATGATGTTCTTGTAAACAAACCACCCAGTGTAACCAATGCCTACAA
GTTCAAAAACACCTGGAAACAATGGAAGCTTGTCGATTGCCGAGATGAGGCCAGTAGATCCCCAAAGAGCCACCAAAGCAGCAAATGCGAGTGA
ACCAATTGCATATTTGTCCTCCACTTTCTCCCAAGCTTCTTGAGCTGTCTTGACGATTTCTGGCAACTCTGTAGTGTCAGATTCGGCAGTGGCC
GAAGCTTCAACTTCGGTAGCTTTCGTCAAAACGTTCCTCGCGATCTTCCGACAGTAAGAAGTGGACTGAAAAGGCTTAGGAGGAAGCATCGGAA
GGGAAATACACGACGGAGAAGAGAAGGAGGCCTGTCGAGTAGGAGAAGCTCTAGAATTAATGATAGTCGAAGAGGAAGAGATAGAAAGGGAAGC
CATGGCTCTGGCGCTTCAATCACAGAAAACAACCCAACAAAATGTATATTTTGTTCGAAAAAAATCAGAGAAGCTTATTATTATAATTATCTTG
AGAGATTAATCC |
Primers for UN20383 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
ATTTTGAGCCACAAGGAGCA |
60.776 |
20 |
GCTTCCATTGTTTCCAGGTG |
60.495 |
20 |
253 |
153 |
405 |
2 |
ATTTTGAGCCACAAGGAGCA |
60.776 |
20 |
AGGCATTGGTTACACTGGGT |
59.333 |
20 |
220 |
153 |
372 |
3 |
ATTTTGAGCCACAAGGAGCA |
60.776 |
20 |
TGGTTACACTGGGTGGTTTG |
59.309 |
20 |
214 |
153 |
366 |
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