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Simple sequence repeat (SSR)
>UN20440
GGATTATTAACGTTGTAAGTAGACAAAGATGCACACGTGCCTGTTTGTCGGAAGGCACGTGAGGTGATCCCAAGACAAGACTCTTTCTCTTCTT
CTTCTTCTTCTTCCCAAAAGTCGTCTCTTTCGATTCATCGAACTCAATCTGCGGATTACGAAACCCCCTGTATCCCCCACCCGGATTACGATTC
AATCTCGTGAATTTTCTCTTGTTTTTAGGGTTCAGATGATGATCACAAAGCGCTAGAGAGATTAATCTACCGATTCAAGATTTAGATTACTGCG
ATAAATGTCGCGATTCGCTCGTGGGGTCGTGGAGAATTCATCGATGGAGGAACCCGAAACGCCTCCTCTTCGTCGTCGTCGTCCGAGTATTTGT
TTCAGGCCGATAAACCCTTCTGATTTAGAACGTCTTGAGCAGATCCATCGCGACTTGTTCCCAATCAGGTATGAGTCTGAGTTTTTTCAGAATG
TTGTGAATGGAGGTGATATCGTTTCGTGGGCTGCTGTTGATCGGAGCCGTCCTGATGGTTACTCTGAGGAGCTTATTGGATTTGTTACTGCTAA
GTTCGTGCTTGCCACAGAAAGTGAAATATCAGATCTAATAAGATATGACTCGTCCAAGGGAGAGGAGACTTTGGTGTATATCCTAACACTCGGA
GTTGTAGAAACCTACAGAAAACTCGGAGTAGCTAAGTCACTAATTAAGGAAGTCATCAAATACGCTTCTAGTATCCCCGTGTGCCGTGGTGTTT
ACCTTCATGTGATTGCACACAACAACCCCGCAATCAGATTGTACAAAAGAATGTCTTTCAGATGTGTACGGAGGCTACACGGATTCTACCTAAT
CAACGGCCAGCATTTCGATTCTTACTTGTTCGTCTACTTTGTCAACGGTTCTCGCTCTCCTTGCTCACCCTTAGATCTTGTGGTGTTGGTTCTG
AACTATGTGAGGAGTGGGATCAAAGTAGTGGCATCAAAGCTGACAATGAAGCAGGAAGAGAAAGGCTTGAAAGGTGTTAAATGCAAAGACAACA
CGCGGTGTCTATTGCCAACTCAGACCAAAAGAAACCTTGCATCATCCGAAAGAGTATCATCAGGGTACGATTACGTTTAGTGTTTTTTAAACTT
AATTCATTGTCCATGTCTTCATATGATCCTTAATAATTTAATGTAATAAAAATGTAAATATTGTGAATGATGTAGTCGAAAAAACTTAATCTTT
TGGAGAAATGAGGTGATACGATCATGTTTATTATTAGGCATAACTGTAACGGGCCCAA |
Primers for UN20440 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
ACGTGAGGTGATCCCAAGAC |
59.969 |
20 |
GAGCGAATCGCGACATTTAT |
60.203 |
20 |
246 |
57 |
302 |
2 |
ACGTGAGGTGATCCCAAGAC |
59.969 |
20 |
AGCGAATCGCGACATTTATC |
60.203 |
20 |
245 |
57 |
301 |
3 |
ACGTGAGGTGATCCCAAGAC |
59.969 |
20 |
ATTGAATCGTAATCCGGGTG |
59.645 |
20 |
135 |
57 |
191 |
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