 |
Simple sequence repeat (SSR)
>UN20564
AATTGTTTTCTTTTGTTTTGAATCCAGATCCTTATTATTCTCTCCTCTCCTCGGGCCTTTTGCTTTCGATCTGATTGATTCATGGCAACGACTC
CTCCATCACACCCCACAGATCTTATTACTTCAGAGGAGCAACCTGTTAATCTGGACATCATGAAGGAGCAGACTGTCCCGGCAAACAACGAGAC
ATCATCAGCCTCTTTTAAGTCCTCTCAGGAGCCTGCGGTTGTAGTTCATCCATCAAAAGTTGCTCCACTCTCTGCACCTTATGGTTTGTCAGGT
GATTTTGCTGCACACTTGCCTAGCAGCATCCTCTCTCCTCAAGCACAAGGCTTTTACTATAGAGGTTATGAAACCCCCACAGGGGAATGGGACG
AGTATTCTTCCTACGTCAATGTTGAAGGATTGGACATCAACTCTCCTGTTGGCTTCAATGAGAATGCTTCTCTAGTCTACCAAACAGGATATGG
ATACAACCCTCAGATGCCATACGGACCATACTCCCCTGCTGCAACTCCCTTACCTTCTGAGGCCCAGCTGTATTCTCCGCAGCAGTTTCCGTTT
TACCAGCAGGTAGTTCCTCCCAGCATGCAATATATTTCTTCCCCAACTCAGCCAGACCTCACCAGCCTCGTTGACCAACAAGGTGGTGATAACA
TAGGACCACCACCACCACGACCGTCCTACCAACCTCACCCTATTGGACCGTTTAATGGAAACCAGACAAACCTTGGTTTCCCTGAGTGGCAGCA
AGGTTTTGACGGGGGGATATGGTCTGATTGGTCCAAGCCTTCTGATATGCACAGACATTCTTCTCCTTTTTCGCCGGCTTTGTCTCCTCAGCCA
CTTGGTTCTTTTGGATCATATGGCCACAACATTCCCATGGGGTCACAGAGACAGGGATCGTTTTACGGTCGTGGCCAGGGCTCTAACTATGGAA
GCAGACTAAATACTTATATGGGTATGGGGAACCAAGGCTGGATTGGCGTTGACAACACTCGGGGGCGTGGAAGGGTTAGTGATCCATCCCTTGG
TGGGGGTTATAATGGTAACTATGATATCCTCAACGAGCAGAACCGAGGACCAAGGGCTTTGAAGCCCAAGGCTCAGGTCTCAGAGGAGCTTGAT
TCTTCTGCTGATACTAAGAAAAATAGCAATGGCAGTCCCAAAGAGGAAGCCAACAACAGTAATCCTGATTTTGTCACTGACTACAGTGACGCTA
GGCTCTTCATAATCAAGTCTTACAGTGAAGACAACGTGCACAAGAGCATCAAGTACAATGTATGGGCTAGCACTCCTAACGGCAACAAGAAGCT
TGATGCTGCTTACCGTGAGGCCAAGGATCAGAAAGAACCGTGCCCGGTGTTTCTTCTGTTCTCTGTAAACGCTAGCTCTCAGTTCTGTGGAGTA
GCGGAGATGATAGGACCTGTGGATTTTGAGAAGAGCGTTGATTACTGGCAACAAGACAAATGGAACGGACAGTTCCCGGTGAAGTGGCACATCA
TCAAAGATGTTCCAAACAGTCAGTTCCGCCACATTATATTGGAAAACAATGACAATAAGCCTGTGACGAACAGTCGAGACACTCAAGAAGTGAA
ACTAGAACAAGGCATTGAGATGCTGAAGATTTTCAAGAACTATGATGCTGAGACTTCGATCTTGGATGATTTTGGGTTTTATGAAGAGAGGGAG
AAGATAATTCAAGAACGGAAGGCAAGAAGACAGCCAAGCTTGCCATCTGCAGGAGGAGGAGGAGAAAACGAACATAATAAACCTGCTGCTGCTT
CGGCTGCATTGCAGACAGACTTTATCAAGAACATGTCTAAAAGTTTTGCTCAAGTCGTCCGCTTGGAGGAGGGAAGCAAAGAAGCAGGGAAGGC
AAGTTCATCTCCAGATGCAATCGCAGCAACATTAGCAGTCTCTTCTGGTTAATCCAACTAGTAAGTAAAAGGCACAATCAATTAGCAAAGACTT
TATGTTTTTTTTCAGTTTCCATAATGATCTTTTGTTTGTTCTAAGAAGGGTGGTGGGTATTCAAATGGGATTTTAAGTCTGGCCTGGTCTGGTT
TTTGTGTAAAGTAAGCTTCTTTTCGATGGGGGTATTTAAGCCATTTTGATTCATTTCCCTCTTTTCAAAGTTATGTACTCTCTCTCTTTGGGGT
TGATAGAAGAAGAAGAAGATGTGTATCAGAGACAATATAAATGTTGCTCTTGTAAAGTAGCTTCATATGTCTTTGCAGGCAGTATTTAATAAAA
GATGCAGATTACACC |
Primers for UN20564 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
GCCTGGTCTGGTTTTTGTGT |
60.012 |
20 |
GCCTGCAAAGACATATGAAGC |
59.866 |
21 |
187 |
2056 |
2242 |
| 2 |
GTGGTGGGTATTCAAATGGG |
59.91 |
20 |
GCCTGCAAAGACATATGAAGC |
59.866 |
21 |
219 |
2024 |
2242 |
| 3 |
GGTGGTGGGTATTCAAATGG |
59.91 |
20 |
GCCTGCAAAGACATATGAAGC |
59.866 |
21 |
220 |
2023 |
2242 |
|
|
