 |
Simple sequence repeat (SSR)
>UN20617
TTCTATAAAATTAGGGTTTTCTTTCCGGCAGCCTTCTCTTCTCTCTCTCTTCTCTATTTTCCTCTCTAGCCTTCCAGTTGCATTCTCACCATGT
CGAGGACGACGAGGACTGCTGCTTCAGAGGCTCGTGATTCGATGGACTCTGAGGAAAGAGTAGACCTTGATCCCGAGGAGACTCTTGAGGAGGA
ATATGAGTACGAAGAAGTCGAAGAAGAGGAGGAGGTTGAAGAAGAGGTGGAAGTTGAAGTTGAAGTTGATGATGACGAGGAAGAAGAAGAAGAA
GAAGAAGAAGAAAAGAGAAAGCATGATGAGCTTCTAGCTCTTCCTCCTCATGGCTCTGAGGTTTATCTTGGTGGGATTCCTACTGATTCTACCG
AAGGGGACTTGAAGGGTTTTTGTGAGTCCATTGGCGAAGTTACTGAGGTTAGGATAATGAGGGAAAAGGAGTCTGGTGATGGAAAGGGGTATGC
TTTTGTAACTTTCAGAAACAAGGACTTAGCTTTTGAAGCAATCGATCATCTTAATAACACTGAGTTCAAGGGTAAAAGGATAAAATGTTCTACG
ACCCAAGCCAAGCACCGGCTCTTTCTTGGTAACGTTCCTAGAAGCTGGACAGAGTCAGACATTAGGAAAACAGCTAGTGGAGTTGGTCCTGGCG
TTCAAAATGTCGAACTCCCTAAGGATCCACAAAATATTGGCCGGAATCGTGGGTATGCCTTCATAGAGTATTACAACCATGCATGTGCTGAATA
CTCAAAACAAAAGATGTCAGATCCGAGTTTTAAGCTTGATGATAATGCCCCAACTGTTAACTGGGCTGAGTCAAGGAATGGAGGAGGAGGAGGA
GACTCTTCGGCTACGCAGGTCAAGGCATTGTACATCAAGAACTTGCCTAGATATATAACACAAGAGCGTCTAAAGTCATTATTCGAACATCATG
GGAAGATCCTGAAAGTGGTCATACCACCAGCTAAACCAGGGAAGGAAGACAGTAGATATGGTTTTGTGCACTATGCGGAGAGGACAAGTGTCAT
GAAAGCTTTGAAAAACACTGAACGATATGAGATTGATGGTCACACGTTGGATTGTACTCTTGCAAAGCCTCAAGCAGATCAAAAGGCGAATACA
ACAACATCACAGAACATGCAGAACTCACTATTGCAGCCAAACTATCCTCCTCTTCTTGGTTATGGCATGGCTCCCAGTCCCTTCTGTGCTCTTG
GTGGATTTGGCGCTCCTGCTTACCCACAACCGTTAATGCATGCGGGAGGTCACGCAGCTGGTGGGATGGCGATGATGCCGATCATGTTACCTGA
TGGAAGAATCGGCTACGTCTTACAACAGCCTGGACTAGCAGCAATGCCACAACCTCCACCAAGGCATTCACCACCGTATAGGGGAAGCGGTTCG
AGCAGTAGCAGCAGTGGCAGCAAAAGAAGTAGCAGCGACAATGGTAGAGGACGAAGCCGTTACAATCCTTATTAGTTGGTTTCATCGTTCTCTT
TTCTTTATTTGGAAAAAAAAACATTTCCAGTCAACTCCCCCCCCAAAACAAAAGTCAGTTTTAATTTTTAAGCATCATGGTTTTTTCCTCTTCT
TTCTGTTACATGTGGTTTTGTAATATTATT |
Primers for UN20617 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
GATCCACAAAATATTGGCCG |
60.153 |
20 |
CCACTTTCAGGATCTTCCCA |
60.042 |
20 |
277 |
682 |
958 |
| 2 |
CACAAAATATTGGCCGGAAT |
59.66 |
20 |
CCACTTTCAGGATCTTCCCA |
60.042 |
20 |
273 |
686 |
958 |
| 3 |
GATCCACAAAATATTGGCCG |
60.153 |
20 |
TGTACAATGCCTTGACCTGC |
59.722 |
20 |
199 |
682 |
880 |
|
|
