 |
Simple sequence repeat (SSR)
>UN20642
CTGTAACACAAGAAATTAGCTTATAGCAAAATCATAAATTCAACTCGGAAAAAAAGTGTGGCAGTGTGAAGCAAAGGCAATGTTGCAAAACTGG
AAAAGGAAAAAAATACAAAAACTAATATCACATCACAATTTGAGAATGGCATCTTCTCAGTTTCAGATGCAAATTTAAAGTTTTGCTCCTTCAA
GAGAGAACTTCAACGCATTTTGTAGTGTTGGGTCCTTGAGACCTTGGAGTGCTGGCCATTCAAAGAATAGCTTAGCTTTATGTCAACGTCTCTA
GGATTCTTCTTGTTATACGAAACAGACATGCTTCCAGTGATCGTCTCACCCTCACATATTGTTAACACATCTTCAAGGTACATGACTGTTTGTT
TCCAGTGCGTAGCCCGGGATCTCGGTCCTGTTGAGAAACCAAGGAGCTTGTGGCACATGGTGAATGATACATCAAAGTAGGCTACAAGGGCGTG
TATGTAGTCATTGCGTTGTGCAACAAGTTTAAAAGGAGCTGTGAAGGAAGCATCACCAGAAGACATCTTCGAGATATCCATTGTCTTAAGTAGC
TTACTATCGGTCACAATCTGGTTTTGGTCGACTGTGTCAACAAGTGGTTCCATCATAGCTTTTTTCTTGATGCATGACATGTCAAAACCATACA
CACTGTTCCAAAATTCGATTTTGTCTTCTTTATACTCTGAATCCTCAATTGCTGTAAGAAACAGAGAGGCTTTGTCTGGCAGCACAATCCCGCC
ATCAACAAGCCATTTATTACGAGCGTAGAGGACACTGTCCAACATATTTTCAAACAACAAAAAGTAGCCCATCCATTCAGATATAATCACATCC
ACTTTAGGAGTGGGAAGCTCTATCTCCTCAATCTTCCCTTTCAAAACCGTTATCACATCAGAAAAGCCATTGGCTTTAACAATCTCCTTTGCCA
TGTCAGCCATTTGAGAACACTCAACAGCATAGACATGTTTAGCTCCAGCCTTGGCACAGAAGAGAGACAAGATTCCTGTCCCAGCTCCAACATC
AAGAACAATTTTGTCCTTGATGAGAAACTTGTTTTGGTAAATTACATTCTGATAAGTCTTTGTTCTCACTACATCCTTCAACATCTCTTCATGA
ATTCCGAAGTGAGAGTAGGAATCGAAGTAGTAATCGGCGCTGGTGGTATCATCAGTGACTTCAGCTGCATCGTTGCTCTCTCCTGCGTCGCACA
TGGATTCATCTTGTCCGGCTTCCAGACCGGAGCCTTCTGCGACTTCGTCTTCATCAGCATCTTCAAAGCGTATCTTCGTGTTCAGGTTGTGTCC
GAAGCTGATAAACTCCTCTTCCTTGTTGTTGTTGTTGTTATTCTTAGTCATGGTTTTCTTCTTAGGTTTCACACACGAGGGAAGAGAGAGGAAG
AGAGAGAAAACGGAGTAAAGAGAGAGAAGGGTTTTGGAGATAGACGCGAAGTGCAAAGATTCC |
Primers for UN20642 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
TCGAAGTAGTAATCGGCGCT |
60.003 |
20 |
CCTCTCTCTTCCCTCGTGTG |
59.978 |
20 |
258 |
1150 |
1407 |
| 2 |
TCATCAGCATCTTCAAAGCG |
60.096 |
20 |
CCTCTCTCTTCCCTCGTGTG |
59.978 |
20 |
135 |
1273 |
1407 |
| 3 |
TCATCAGCATCTTCAAAGCG |
60.096 |
20 |
AATCTTTGCACTTCGCGTCT |
60.022 |
20 |
199 |
1273 |
1471 |
|
|
