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Simple sequence repeat (SSR)
>UN20683
GGGCTTCTCTCTTTGAGAAAGTAAAAATAATAAAAAGGGAGGAAAAATGGTTACCACCCGGCAAACGAAGGCCAGAGTCACCACATCTTCTCAC
CGCCGGCAACTACCGGAGCCAGATTCTTCGGTGAAGAAGTTCTTCAAGGTGGTTTTACCTTCAACAATGAAGAGAAACATGCTGATGATTCCAC
CAAGATTTGTGAAGCTACAAGGGAGTACACTCTCTGAAGTCGTTACATTGGAGACTCCTGTGGGATTCAGGCGTTCGATAAAGCTTAAGCGGAT
CGGTGAAGAGATTTGGTTACATGTCGGTTGGAGTGAGTTTGCAGAGGCTCATTCCGTCAGTGAAGGCCATTTTCTCTTCTTCGACTACAAAGGA
AACTCAAGTTTCAGTGTAATGATCTTTAGTGTCTCGGCTTGCGAGATTGATTATCCACTGGATGCAGTTCATATCAGTGACAGCGACGATGACG
TAATGGACGTTACAGACGAAGGGTTTCTTGGAACCCAAGGTGCTAGGAGAAATGATCAATCTGTTGATGATGGTGGTAAGAGACCAAGAGACGA
GGACTTTGAGAAGATTCTAAACGATGTTGATGGGATCAATTCAATCAAACCGCTTGAGGAAGAAGAAGAAGAAGCAAGAGAGTCTTCAGGGGAC
ACCAGTTCTTTTAACAGAACAGAAGACCTGCATGTGTTTATGTTGTGTAATGTAAAATATTGTACGTCCTTAAATGAAACTCCAAAAACTTGGA
ACTGTAATGTCTAAACAAAACTGTAACCAGGTCTTGTTTTGATTCTTAGTTCTTTCATCTCAC |
Primers for UN20683 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
CGGCTTGCGAGATTGATTAT |
60.196 |
20 |
GAACTGGTGTCCCCTGAAGA |
60.088 |
20 |
256 |
411 |
666 |
2 |
CAGACGAAGGGTTTCTTGGA |
60.224 |
20 |
GAACTGGTGTCCCCTGAAGA |
60.088 |
20 |
184 |
483 |
666 |
3 |
CGGCTTGCGAGATTGATTAT |
60.196 |
20 |
CTGGTGTCCCCTGAAGACTC |
59.682 |
20 |
253 |
411 |
663 |
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