 |
Simple sequence repeat (SSR)
>UN20708
GGCTCCGCGTAAGACATGCAACTGCTGGCCAAAATGGTGTTTCATGTGCTGTGGTTCAAGGAAGAACCGTCAAGCAAAGAAGGTGGCTGCGGAT
AAGAAGAAGAAGAATAGGGAAGCGTCTAAGCAGATCCACGCTCTAGAGAATATTGAAGAGGGTAGCGTCACTAAAGGATCTAATGTAGAACAAT
CAACGGAGGCAATGCAGTTGAAGTTGGAGAAGAAGTTTGGTCAGTCTCCTGTGTTTGTTGCGTCTGCTCGTATGCAAAACGGTGGGATGGCTAG
AAACGCAAGCCCTGCTTGTCTGCTTAAAGAAGCTATCCAAGTCATTAGTTGTGGATATGAGGATAAAACCGAATGGGGAAAAGAGATTGGGTGG
ATCTACGGTTCTGTTACTGAAGATATTCTCACGGGTTTCAAGATGCATTCTCATGGTTGGAGGTCTGTTTACTGCACACCTAAGTTACCTGCTT
TCAAAGGATCAGCTCCAATCAATCTTTCGGACCGTCTTCATCAAGTTCTTAGATGGGCTCTTGGTTCCGTTGAGATTTTCTTGAGTAGGCATTG
TCCTATTTGGTATGGTTATGGAGGTGGTTTGAAATGGCTTGAGAGGTTGTCATACATCAACTCTGTGGTTTACCCTTGGACCTCTCTCCCTCTC
ATCGTTTACTGTTCTCTCCCTGCCATCTGTCTTCTCACTGGAAAATTCATTGTTCCTGAGATCAGCAACTATGCGAGTATCCTCTTCATGGCGC
TCTTCTCGTCCATTGCTATAACGGGTATCCTGGAGATGCAATGGGGCAAAGTTGGGATCGATGATTGGTGGAGAAATGAACAGTTTTGGGTCAT
AGGAGGTGTCTCTGCGCATCTCTTTGCTCTCTTCCAAGGTCTTCTCAAGGTTCTTGCTGGTGTGGACACTAACTTCACGGTCACGTCAAAAGCA
GCTGATGACGGAGAGTTCTCAGACCTTTACCTCTTCAAATGGACTTCACTTCTCATCCCTCCAACGACTCTCCTCATCATAAACATGATTGGAA
TCGTGGTCGGAATCTCTGATGCTATAAGCAATGGATACGACTCATGGGGACCGCTTTTCGGAAGATTGTTCTTTGCACTTTGGGTGGTCATTCA
TCTTTACCCTTTCCTTAAAGGTTTGCTTGGGAAACAAGATAGAATGCCGACCATTATCATCGTCTGGTCCATCCTCATTGCTTCTATTCTTACA
CTTCTTTGGGTTAGAGTTAATCCGTTTGTGGCGAAAGGTGGTCCTGTTCTTGAGATCTGCGGTTTGGACTGCTTGTGAGATCGGTTGGTGAAAA
AGGTTTGGTTCCCACGGATCAAGAGATGGTTTATATACCTCCTCTTAAGACTCCTTCACTGTGTTCATTACATAATGACAAGAAAAGAAAAAAG
GGTTTACATTTGTTACTTTTTGCAAGAATGTGTTGTAGATATAGATGAAGAAGAAGAAGAAAGAAAGAAGCTGTGGTCTAGTATTTGTTTTGTT
CTTTGGTCGTGAGAAACAAAGATTTGTTTTCAAATTATTCTTTAATTAAATATTTCTGTTCTCTTTGAATATTACATAAGAGGTGTTTCAGTCT
GTAATCTTTTTACCTAAAGAACTTTGATTTTATTTTCATTTAGG |
Primers for UN20708 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
TTGGACTGCTTGTGAGATCG |
59.984 |
20 |
TCACGACCAAAGAACAAAACA |
59.205 |
21 |
231 |
1286 |
1516 |
| 2 |
CCACGGATCAAGAGATGGTT |
59.927 |
20 |
TCACGACCAAAGAACAAAACA |
59.205 |
21 |
189 |
1328 |
1516 |
| 3 |
TGTGAGATCGGTTGGTGAAA |
60.088 |
20 |
TCACGACCAAAGAACAAAACA |
59.205 |
21 |
221 |
1296 |
1516 |
|
|
