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Simple sequence repeat (SSR)
>UN20904
GGGGCTTTTATGCTAAATGGTAATGTAGACATACAAGCAACCCTATCCTTTGGCTATGCAAGCAAGCACCTACACTTCCTCTTTGTCTCTACCA
AAAGTAAAGCTGGTCCAGACTCGAAACAAAAACAACAACAAAATATTACATCCACAGTTTTTTAACTTATTCATTTGCCAGAAATGACTGACTA
CTAGGCATCAGGCAACAGTTCTTGTGATTTAAATGGTAGGCTAGAGAAAGAAAGAGAGTCTCGGTATGTGCCATGTGATCAGTAAAGGAGTTTA
GGCTTTCATCTCCTCAGCAACAGCAGAACCTCCTGCTTTCTCCTTCTCTGCATCATCTCCTTTCTTCTTCTCCTCAGCAACAGCAGACCCTCCT
GCTTTCTCCTTCTCGACATCATCTCCTTTCTTCTCCTCCTCAGCAACAGAAGACCCTCCTGCTTCCTCCTTCTCTGCATCATCTCCCTTCTTCT
CCTCCTCAGTACCAGCAGCCACTCCTGCTTTTTCCTTCTCTGCATCATCTTCTTTCTTCTCCTCCTCCTTAGCACCGGCAGAACCTCCTGCTTT
CTCCTTCTCTGCATCATCTTCTTTCTTCTCCTCCTCCTCTTCTTCTTGTTCATCAACTTCTTCTGCTAATTTGGTGAGCTCACTTTGGATCATC
AGCTTTATAAAGGACTTTCTTGGGGTGAGATCTTCTTTGAACTCCTTAGCAAGTTCTTTGAGGATGTCCGTGAATGTAGCCGTATTAAAATCCA
CCCTTTTCAAAATCTCAACAATTGCTTTTTTGAGCACTTTATCGCTTGGCCCTTTGGTTTTCTCTTTCCCTTTTCCAGCACTTTTTACTTCTGG
CTTCTCTTTTGAAGCAGAAGACTTTGAAGGGGCCGAGGCCTTGGTAACTTTTTCAGACTTCTTCCTCTTAGAAGATGCCTTTGGACTTGCATCA
CTGTCATCGTCAGTCTTCTTTCGTTTTGCTGATGATCGCTTCTGTGTAACTTTCTCAGGTGGGCTGGATTTTGCAGCAACTGCCGCTTTCTTGG
TTCTGGCTCTCCCTGCTGATTCTTTCTTCCCAGCTGACACTTTCGAACCACGCTTCTTCTTCTTCTTTGGCGTTTCTTCCTCAGAATCCTCCTC
AGGCTCATCTTTCTCCTCGCTTTCAGACGGCTGAGGTGCCTCATCCTCGGATTTGTCAGGAATACCATTTTCGTTCTCCTTTTCCTCATCTGCA
TTCTCCTCTTTCTCTTCTTCCTCTTTCCCCTCTTCAGACTCATCTTCAGAATCAGCTAAAATCTTTTTGGCAGCCTTTGTTCCTTCTCCAGACT
TCGTTTGCTCTTGGCCGATCGTTTGGAGGATGAACTCGCAGCTGCAGACGAGCTTTGCTTGGGAGTTCTCTTGCGCTTTGCTCCAGTACTTGAC
TTATCTTTCTCATTAGCCGGAACGTCACCTTTCCCATGAGGTTTCTCCAAAAACTCAATCAGTTTTGTAATAATATCTTCCTTCTTTGTTGTAG
CCTTGGAAACATGAATATCAAACACATCGCAAAACTCCCACAGTTTCTCTTTGTTACATTTATCAAGCTTTTCTTTTATCTTCTCTCTTGCCTT
TTCCTCTTTTCCATGCCAAACAAAGCCTGAGAAGCCCAATATGTTTGTCTTGATCTGAGCAGCCTTCCCTCTCCTCGCAAATAGAATTTGGTGT
AGCACCTTCAGAATTTCATCCGACTTCTTCCTATTTACCTTGTATGCAACGCTGGGAATATCTTTGAAATATACACCTTGCCCATTTTCAATAT
GGAACTCCTTGGAAGAGTCTTTATCAATCACTGCGACAAGCCTCTCAACAGATTTACGCTCACGCACAGGGCGGTCAGAGAAAGGAGTCTTCGG
TTCTGCATCCTTTTTCTCTGCCTCACTTTTTGTCTTCACGTGAGCCTTTCCCTTCCCACGTTTCTTAGAAACCTTGATCTCTTCTTTCTCATCT
TCCTTGTCATCGCCGCTCT |
Primers for UN20904 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
CAGCTGACACTTTCGAACCA |
60.025 |
20 |
AACAAAGGCTGCCAAAAAGA |
59.861 |
20 |
239 |
1065 |
1303 |
| 2 |
CAGCTGACACTTTCGAACCA |
60.025 |
20 |
GAACAAAGGCTGCCAAAAAG |
59.861 |
20 |
240 |
1065 |
1304 |
| 3 |
TTTGCTGATGATCGCTTCTG |
60.096 |
20 |
CGAGGAGAAAGATGAGCCTG |
60.088 |
20 |
183 |
965 |
1147 |
|
|
