 |
Simple sequence repeat (SSR)
>UN21000
GGAAACCCGCGTTAATTACGGTTTTGTTCCTACGCGCAGCTCAAAGACCTCCTCTCTCTCTCTCTGTTCTGTCTTTCGTCTGGTCGGATCAGTC
GAAAAAAGCTTGAAGAATTTGATACTTTTGATTTCTAAGTCCATGGAATCTGCAAAAGAGCGTGATACTTTCGTCTACCTCGCAAAGCTATCTG
AACAAGCTGAGCGCTATGAAGAGATGGTGGAGTCGATGAAGAACCTTGCGAAGTTGAACGTTGATCTGACGTTGGAAGAGAGGAACTTGCTCTC
TGTTGGATACAAGAACGTGATCGGTTCAAGGAGAGCTTCGTGGAGGATCTTCTCGTCGATCGAGCAGAAAGAAGCAGTGAAAGGGAACGATGTT
AATGTAAAGAGGATCAAAGATTATATGGAGAAGGTTGAGTTAGAGCTCACAAGTATATGCATTGACATAATGTCTGTGTTAGATGAGCATCTGA
TCCCATCTGCTTCCGAGGGTGAATCAACTGTCTTCTTCAACAAGATGAAAGGTGATTATTACCGCTATCTTGCTGAGTTTAAATCAGGAGATGA
GAGGAAAGAGGCTGCTGATCAGTCTTTGAAAGCCTATGAGATTGCTACTACTTCTGCTGAGGCTAAACTTCCTCCTACACATCCAATCAGATTG
GGATTGGCTTTGAATTTCTCTGTCTTCTACTATGAGATCATGAACTCACCTGAAAGGGCATGTGAGCTTGCTAAGCAGGCGTTTGATGAAGCAA
TCTCAGAACTTGACAGTCTGAATGAGGAATCTTACAAAGATAGCACTTTGATTTTGCAACTCCTTAGGGACAATCTGACCTTGTGGACTTCTGA
CATCCCTGAAGAAGGAGTAGATGATGCACATAAGACGAATGGTTCTGCTAAACACGGTGCAGGTGAAGACGACGCAGAGTGATCTGATGATATG
TGTGCACCCGCAGCAGCAGTAATGGACAAACATGTTTCAAGAACAACTGAATGTGCGGTGAATAATAGCAAAAAACCTATAGTTCTTATGTTTC
CTAGTATCATTATTGTCTATATATTGTACTCTCTGGTTTGATGTATGCTTGTCTCTCAAGACACTCTTTTCTTGTTTGTGATTTGTATTCAGTA
CTGTCTTCTTCACCCATTGCTCTTCTCTCTCACTATGTATTCCTATTTTCTATGGATCCACTCTTATAACTCTGTTC |
Primers for UN21000 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
CCGCGTTAATTACGGTTTTG |
60.359 |
20 |
TAGCGCTCAGCTTGTTCAGA |
60.035 |
20 |
198 |
7 |
204 |
| 2 |
CCGCGTTAATTACGGTTTTG |
60.359 |
20 |
GATCAACGTTCAACTTCGCA |
59.847 |
20 |
248 |
7 |
254 |
| 3 |
CCGCGTTAATTACGGTTTTG |
60.359 |
20 |
AGCTTTGCGAGGTAGACGAA |
60.154 |
20 |
177 |
7 |
183 |
|
|
