 |
Simple sequence repeat (SSR)
>UN21002
GGTGTCTCTCTCAATTATTAATGCTTCATTGTTAAGAAAAAAAAAGCCAAACAAATCCATAGTAGGGGGGAGAGGAAACAGTGTTATAACAACA
AAAAAAAAACTTCAGCCTCGGATTCAAAACAGAGATAACCTAAAAGGCTCAATATAGCAACTTAAAAGTTAACTTTTTCACATTGTTCATCAGA
AAGAAAGGATAAATTCACAACTCCATCGTTTTCTTTGTCACTTAAGCTCTCCTCTTCCCATCACTCGCTTGCTCAACGACCAGCGTTCAAGTTA
AAGAGCATGCTTTGTCCACCGGGTAAGTAGGCCACGTTCGGAGACCTAGCCAGTGTAGCTGCAACCTCCCTCGAGGCCTCAATCCTCCTGAGCT
CGATCAGCCCCATCCCTGCTTTAGCAGTTGCATCAGATATCAACTGAGCAGCTTCACTCTCACCTTCAGCTCTAATAACAGCCGCTCTCCTCTC
CTGATCAGCCTTCATCACCACAAACTTGGACCTCTCGGCTTCCTGCTGAGCCACTTGCTTCGCCTCCACAGCCCTCGAGAACTCCATACCGTAT
GACAAGTGCGTGATGGCAACATCGTCGAGCTCAATGTTAAAGTCCCTAGCACGCTTGATGAGAGAGTCACGGACAAGTGCCGACACTTGAGGAC
GCTCTGTGAGGAGCTGATCAGCATTGAACTGAGCAACCACAGCCTTCAAGACCTCGTTTCCAATGGAAGGAAGAACCTTTTCGTCGTACTCGAG
ACCCAATGTTTGAAAAATGGTGGGCGGACGCGAAACCTCGGGGCGAGAAAGAACACGAAGGGTGAGATTAACCATCTGGAGATCCTTGGTACCG
GACACGGAGGAGAAAGTGTGTGGCTTCGTGCGGATGTCGAAGATGTGAGGCCTCTGGAGAATGGGTATCAGGAAGTGAGTCCCTTCACCGACGG
TCTGATCCAACACTCCTCGGAACCGATCGAACAGCACCGCTCTCTCGCCACCATCGACAGTGTAGAGCGACGAGGACAGAACCGTCGCAGACAC
TCCGAGACCGAAGGCCGCCTTCGCTAAATTCGTGAGGAAAGAAACCGCTGCTTGACTTCCCATCTTGCTCCCCAAGAAAAAAATTAAGAAATGA
GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGCGACTGGGTAAGCTGTGCTCGAAGCCCTAGCAAACCTCGGCCTCCTTCTCCTCTTTTTCC
TCGTCGGCCTCCTTCTCTTCTTCTCCCTCGTCGGCCTCCTTCTCTTCTTCTTCCTCGCCGGCCACCTGCTCTTCTTCTCTTCTTCTTTCTCTAA
ACTCTCTGATTTTCGATTTATCTCTTCATATTCATGCTAAGAATTGCTAGATCTGTGTTGTGGTTGTCGAAATCTGATAGATTAAGGTTCTCTG
ATTTTATTTCTGTCTTTAAACTTGCTGAAAAAGTTGTCGATTTGATGTGATCTGTTTCTGAAAAAGCTGTCGGGTTAATCTGTTCCTTATTGCT
CCAATATACTTGTCTTTGGTTGAATTCAAAATTGATCTGAGAAGTTTGGGTTTGATTTTTGTTTTGATCTGTTACGCTTCTTTTCTATTTTCTG
TTTCTGATTATCAATCTGATTTATTAAGATTTTAATTGTAGTTTTGAATCTGTTTCTGTTGGCAAGTTGATTGTTTTTGCTTTCTTTTGAATTT
CCTATTGCTGTGTGTTGCTTTACGATCTCTACTTCGCAATCACATTCACAGGAAAACTTGCTTTTTGATGTTCAAGAAAATCTGAAAGTATGGT
TTTGGATTCAGCGCCTTGTCCCAACAAGTAGTGGCCAGAACAGAAGCTTGTGAAGGATGGTTTCATCATCAGACACCAACCAAGATCCACTGTC
CTGAAAAATACCGAGAGTCAAAGAAGATTGACAAGTACATGTATCAGAGTCGAAAAGATGACAGAAGATGACAGAGAACATCAGAGAGTCATGG
ATGCTTAGTTAGCTTAGCTATATGTTTGGCTATTTTAATTGTCGTAGTTTTT |
Primers for UN21002 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
GAAAGAAACCGCTGCTTGAC |
60 |
20 |
AAGAAGAGAAGGAGGCCGAC |
59.957 |
20 |
174 |
1071 |
1244 |
| 2 |
GAAAGAAACCGCTGCTTGAC |
60 |
20 |
AAGAAGAGAAGGAGGCCGAC |
59.957 |
20 |
201 |
1071 |
1271 |
| 3 |
CCATCGACAGTGTAGAGCGA |
60.008 |
20 |
AAGAAGAGAAGGAGGCCGAC |
59.957 |
20 |
254 |
991 |
1244 |
|
|
