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Simple sequence repeat (SSR)
>UN21092
AACTAAATACCACCGATCAACTTCACTTTCTCTCTCTCTCGGTTTCACGTTAGCAAAGATGGCAGAGAAAGAGTTTGCCCAAGAAGCAGATGTA
AAGATCAGAGCTGCTGCTGCGGCTTCGGATCTTGAACAGATGGCTGCAGAGTCCTCCGTGGTTCCAGATTTCGAGAGAGGGAGGTTCTACGACG
TGTATTCAGCCAGGAGGAACGAGAGGTTGAAGAGGAAGAACGGAGGAGAAGAAGAAGATGCTGAAGTCAAAGGAACTCTGTACAATCTCGGAGT
GGATCCTATGCCGACCAAGAGAAGAGGAACCTTTAAGAAGAAGAAGACGGTGGTTGAGACATCAACAACAACGCCGAGGTATTCTCTGAGGAGC
ACAGTGAACAAAGATAACAAGAAGCCTCTGAGTGTCGCTGTAAGTACTATGAAAACTGTCAAGAGCACCAGGAGGGTTATGAGTATCTGATGAT
CCTGCTCTGCTTCTATCTACTCTTTTTTTTTGCTTTTTTTTTGCTTTGCTTTTGGTGATTCTGTCAGGAAATTGAAGTTTGGGGTTTTGATTTC
CTTCTATCTACTCTTTGCAGTATTGTTCTGCTTGTCGGGATGTCGACATAAATAAACCCATGAAACTTTGTTCGTTTTGTTTTTCTTGAATTAC
TCATACATTCAGATATGCTTTATCTGTGAACTAATGCGTAAAAATGACGTTTTGCGACAGAG |
Primers for UN21092 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
AAATACCACCGATCAACTTCA |
57.079 |
21 |
AGGACTCTGCAGCCATCTGT |
60.017 |
20 |
145 |
5 |
149 |
2 |
AAATACCACCGATCAACTTCA |
57.079 |
21 |
TCCTCCGTTCTTCCTCTTCA |
59.92 |
20 |
231 |
5 |
235 |
3 |
AAATACCACCGATCAACTTCAC |
57.982 |
22 |
AGGACTCTGCAGCCATCTGT |
60.017 |
20 |
145 |
5 |
149 |
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