 |
Simple sequence repeat (SSR)
>UN21096
AGGGACCGCAATACTCTCACTGGTACGAATCGAAGAGCTGAACAGAGAGAAGACGAAAATGGCAGGCGGAAGCGAAAGCGGCGGCGGCGGCGGA
ACAACATCAGGAGCATCGGCGGATCTTCACTCCGCGGCGAGATCCGGTGATTTAGCGGCAGTTCAACTAATCATCAGCTCTAATCCTCTTGCCG
TCAATTCTAGGGATAAACACTCTCGGACTCCACTACACTTGGCAGCATGGGCAGGGCACAACGAGGTCGTGAGCTACTTATGCAAGAACAAAGC
CGATGTTGGTGCTGCAGCAGTGGATGATATGGGTGCCATCCACTTTGCTTCTCAGAAGGGACACTTGGAAGTTGTGAGGACTCTACTGTCTGTC
GGAGTTTCTTTGAAGTCCATCACTCGCAAAGGACTGACACCTCTTCACTACGCTGCTCAAGGTTCTCACTTGGACCTCGTCAAGTACTTGGTTA
AGAAAGGAGCCAATGTCAGAGCCACGACTGAGGCCGGGAAGAATCCTGCGGATGTTGCGGGGAACCCTGAAACGCAAAGCTTCCTTGAAGAATG
CGAAGAGCAAGCGAGGAAAGATAAGGTGAAGAAGAACAGTCAGAAAAAGACAGAGGAAGTGAAGAAACCAGAGAGTTCTAGTGTCGAAGGAGCA
GCTGACAAGGGTTTGAAAAGAAAGGATTCTGAGGATGATGGGAACGAGCAGGAGGAAGAGAAAGTAGAAGCTTCTTCGAAAGCGAAGAAGCCAA
AAGTTGTTCTTCGTCATCTTCAAGAGGAGACTGATGACACCGAAGCTGATCAAGAAGAAGTGTCTACTTGAAATGAGTTGTAACATCCATCACA
TGAGATAATTGAGAGATTTTACCAATACCTTAGTTTGTTTCTATGATACGTATAAGTTTGTAGAAGAATTCATCAGTTTCTTTTAGGCTGTTTA
ATCAAAACGTTCATCAGATTCTAAAACTGTTCTCTGCATTTGCTTACTTTTGCTGTAAATGGTTTAAAGATTACATCACACAACTCTTTATACA
TGTGTTTCTTCTAAGCCTGTGGAAACAGAATTTTCAAGTACTGTGTAGCCATCCATCCGAGAATGTAGAAGTAAACAATGACCAAACACGCACG
CTTCACTTGTACCAGGAGATTCACTTTAGACAGCCGGCTCTTAACCGAACAACAAGCTCGAGGGAACCAAGATTTTGCATTACTTAAGATCCGT
ACGATGAAGACTGTGACTATAGAAGTAGAAAAGCCAGATACAACGCCAGCGATCACATCATATCTCCAGTACTTTGGTCTTCGTTTTCCATTAA
ACCAGGACTGTATTAACTTGGAGACTAAGACAGCGTATTGTTTAAAAATGTCGGTGAAAGAAAGATCATTTGGTTGGCAACCGAAAAAGCCGTC
CTGATAAAGCTTGATTTTTGGAATCCCTAATGTGTACCAGCAATCGTAAGTCTCATTCACCTTGAAGTTATCTTTGGTAAGCAAAGCAGCACCA
AAGTTAGGTCTGCACTCAGGAGGAAGGGCTTCATTTGGTGCTTCTGAGAACGCTAGCCTCGTTTGACCCATTAAGTGATCTTTATATTCTACTT
TGAAGACAGAAGCCCAATAGTAATCATAGCGACATCTGAATTTATCTCTCTCAAAAGGGTGAAACACATGTTGTGCTTTGCTGTTCAAAAGTCC
AATGCCGCACACTTTGGAAGACCTAAGATCAACAGAGCTGGAAAGAATCTTGCAGCGGGAAGCAAGAGAGGCGGTGGAGAAGAAGAAGAAGAAA
CCCACAATTCACCGAGTATAATCACTAACACTCCTAAGAGAAACGACAAGACGAAGAAGACGATGATCCAGAATCCTATCACTGTACAGAATCG
TAAAGCTAACAAAGAGAAAACCCTCTTTTGCTTCTTCTTCGTATCTTCCGAATCCATTTTAAGCTTTCTTCTTCTCCGTGTGAGTTTACTCAGA
ACAGAGAAACTCGAGAATCCATTTTTCAACGGTGATCGGAACACCGAACGTCGGGTCACCGGAGATCAAATCTTATGGATTTCTGATTTTTTTT
TCAGATTGTTTTTTTTTTATTGGCCGTTTATTTCCCCTTTTGACTGTCGTTGTGACGATTTGAGTGCCAGTGTATGCAACTAAAACTTAAAATA
AAAGAGATTTTTTTCGGACCC |
Primers for UN21096 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
TGTTGTGCTTTGCTGTTCAA |
59.044 |
20 |
TCGTCTTCTTCGTCTTGTCG |
59.161 |
20 |
183 |
1667 |
1849 |
| 2 |
CGCACACTTTGGAAGACCTA |
58.923 |
20 |
TCGTCTTCTTCGTCTTGTCG |
59.161 |
20 |
152 |
1698 |
1849 |
| 3 |
TGGAAAGAATCTTGCAGCG |
60.08 |
19 |
TCGTCTTCTTCGTCTTGTCG |
59.161 |
20 |
119 |
1731 |
1849 |
|
|
