|
Simple sequence repeat (SSR)
>UN21127
TCTCAAAGAGTCCGAGTTATCTTTATTCTTCTCGGATCACGATGCAGCACCCACCACCACCCGGAGGTCTCCTTCCCCACCACGTTCCTCCTCC
GTCTGCTCAACAGCACTACGGTTACCAGCAACCCCCTCCTTACGCTGCTCCTCCACCACAGATGTGGAATCCACAAGCGCCGCCACCAAGCCAG
CCTATGACCGCCGACGAGATCCGTACTCTCTGGATCGGTGACTTACAGTTCTGGATGGATGAGAGTTTCCTCTACAGTTGTTTTGCTCACACCG
GAGAGGTTCTTTCTGTTAAAGTCATCCGTAACAAGCAGACATCTCAGGTTGAAGGCTACGGTTTCATCGAGTTTGTATCTCACGCTGCTGCTGA
ACGAGCTCTACAAACATACAACAGCACTCCCGTCCCTGGCCTTCCTGACCAGCTCTTTAGATTGAACTGGGCCTCGTTGGGCTCTGGAGATAAA
CGTGACGATTCACCGGATTACACTATCTTCGTTGGTGATCTCGCCGCTGATGTTACGGACTATGTCTTGCTAGAGACTTTTAAAGCATCTTATC
CTTCGGTTAAAGGTGCAAAGGTTGTTATTGATAGAGCCACTGGGCGTACGAAGGGATATGGTTTCGTTAGGTTTTCTGATGAGAGTGAACAGAT
TCGTGCAATGACTGAGATGAACGGTGTTCCTTGTTCGACAAGGCCTATGAGGATTGGGCCAGCTGCTAGCAAAAAAGGTGTGTCTGGTCAGAGA
GATTCATACCAGAGTGCTGCTTCAGGGGTTCCAACTGATAATGATCCCAATAACACAACCGTTTTTGTTGGTGGATTAGATCCCACTGTGACAG
ATGATCATCTAAAGAATGTCTTTAGCCAGTATGGCGAGATTGTGCATGTGAAAATACCTGCCGGAAAGCGCTGTGGATTCGTTCAGTTTTCTGA
GAAAAGCTGTGCAGAGGAAGCAATTAGGACGTTGAATGGAACGCAGTTGGGTGGAACAACCGTCAGGCTATCATGGGGACGAAGTCCTTCATCT
AAACAGGCGGCGGATCCGAGTCAGTATTATTACGGTGGGTATGGACAAGGTCGGGAGCATTATGGATACTCCATGCCGCAAGATCCTAACGCAT
ATTACGGAGCTACCCTGGCGGGTATCAGCAGCCACCACAGTGGGGCAGCAACCACCTCAGCAGCCACACAGCAGCAACAAGTCGGGTTCAGCTA
CTAGCTGGCGAGAGTGTTCTTAGCTCCACTGTTTGTTGTTTGTCTACTTTGTCATGAAACAGACGCAGTTGACCTCTCTCTCTCTCTCTCTCTC
TCTAGGACAGTTTCTTTTGCTCAGCACTGATACTAAAGGAGTGTGAAGAGATTTGACTCTTAATAATGCTTTGTGTGCTTCTGTTTTCTTTATT
TCTTTTGCTTGCTTTAGAAGTGTAGAACATGAACGGCTATAATAAGATTTTAAGCTTCCATTTATAAAATAGCCAATCATGTTCT |
Primers for UN21127 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
GATACTCCATGCCGCAAGAT |
60.066 |
20 |
CAGTGCTGAGCAAAAGAAACTG |
60.225 |
22 |
247 |
1099 |
1345 |
2 |
CGCATATTACGGAGCTACCC |
59.592 |
20 |
CAGTGCTGAGCAAAAGAAACTG |
60.225 |
22 |
222 |
1124 |
1345 |
3 |
GATACTCCATGCCGCAAGAT |
60.066 |
20 |
TCAGTGCTGAGCAAAAGAAA |
57.346 |
20 |
248 |
1099 |
1346 |
|
|