Simple sequence repeat (SSR)
>UN02236
AAAACACGCGAAGTTAATAGTTTTCCAATCACAAAAAAAACATCATCAGACACACACACACTCGCACACTTCAGCTTTATTCATCGCACCCATG
CAACTGCATCAATCTCATCTCTCGCTTTCTTATACAACTCCAGCCTCTGCGCGCACTCTACTCTCCTCCCCATCAATGCCGGATCTTCATCTAG
CAACAGCCCCAACTGTTTCCCCTCTCTCTTGCTGATCTGACTGTAGAAGTAATTAAGCAACGCGAGCTTAGCCTGTCTAACCTGACAGTAAACA
CAAGCTTTCGGGATGGTGTTGCGAAGCGTGTCCGAAACCATACCGACGTACGCTGACACGTTCGATGCTATCCTTCTGAAATGTCCATCTCCGT
ACAGGTCTTGCGTTGCTGGCGAGGGAGAAGAAGCGGTTTGGTTTCTGCTGTTGGCTACTACCGCAGGTCTTTCCATTTCTTGAGGAAGTTTCCT
GAAGAACTCAGCTGTCAGATAAGCAGACTCCATCTCGACGAGTCTAATAACCGACTTCTTGCGCC |
Primers for UN02236 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
CGCGAAGTTAATAGTTTTCCAA |
58.507 |
22 |
TCAGCAAGAGAGAGGGGAAA |
60.065 |
20 |
217 |
7 |
223 |
| 2 |
CGCGAAGTTAATAGTTTTCCAA |
58.507 |
22 |
GATGAAGATCCGGCATTGAT |
59.861 |
20 |
179 |
7 |
185 |
| 3 |
CACGCGAAGTTAATAGTTTTCCA |
60.511 |
23 |
GATGAAGATCCGGCATTGAT |
59.861 |
20 |
181 |
5 |
185 |
|
|
