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Simple sequence repeat (SSR)
>UN21133
TTTTTCAGACCGAACACGAAAACAAAACACGAGTTTAAAGAGATTCATTTGAGCTGAAGGATTCAAGAATTCGAAAGACTTCGATTCCAGAATC
ATTTCTAGATCAATAAGGTTGTATCATTGGTGGCTAAAGTTAAAGCATGTCCGATCATCTGAGTTTATGTACGGATCGTCTCATAACTGCTGCT
GAGAGCCTGAAGTCAGAAAAAGATGCTGATTCTTCTGGAGAGACTTGCACGAACTTGGCTTCTTCTTCTTCATCTACGAATGAAGCTGAGGTAG
TAGCGAGGGAGTACTATGCTGCCGTTGAGGAAGAGGAACCACTTCTCCAGTCTGTTGAGTGCCGTATTTGCCAGGAGGAAGATACCACTAAGAA
CCTGGAGGCTCCTTGTAGTTGTAGTGGCAGTTTGAAGTATGCCCATCGCAAGTGTGTTCAGCGTTGGTGTAATGAGAAAGGCGACATAACTTGC
GAAATATGCCACCAGGCTTATCAACCTGGATATACAGCACCTCCTCCTCCTCCTCCTGATGAAACAATAATTCACATTGGTGACAACTGGGAGA
ATGGAGTTCCCTTGGACTTGAGTGACCCACGCATCCTGGCAATGGCTGCAGCAGAACGCCATTTCTTGGAAGCTGACTATGACGACTACTCTGA
GTCTAACTCTAGCGGAGCTGCCTTTTGCCGCTCTGCTGCTCTCATCCTAATGGCACTTTTACTGCTACGTGATGCCCTAAACCTCACAGCTAAC
CCAGATGACGAGGACGACCCAACAGCCTTCTTCTCGCTTTTTTTTTTTCGTGCTTCCGGATTTCTCCTGCCATGCTACATCATGGCATGGGCCA
TCGGTATACTCCGACGCCGGAGGCAAAGACAGGAAGCAGCTGTAGCTGCGGCGGAAGTTGCTTTTATGATACACGGTGGTGTGCCTCCCCAACG
CAGGGGACTTCACTTTGCTGTAGTACCACCAGAGCAGCCGCCCATACCCAACCAAACACCCCCTGTCTGATCTTTCAAGGCAATTTGATTCTCC
GGTAAGACTATTTATTACTAAAGAAAGAAACTGTGAACTTGGTTGTTAAAAGAAAAGAACGTCCCACCTACTTATGCTTCTTCACGTGCTTTAT
CATCATCTTCCTCATATGTTTGTGTTCTCTGAATCTTGTTTAATGTGTTTACTTCTCTACTCCTAAATGTTGTCACGGACAAAGAGCTCTCATG
TACAGTCTTATGATTATCTTTCCGC |
Primers for UN21133 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
AACTTGCGAAATATGCCACC |
59.967 |
20 |
GCCATTAGGATGAGAGCAGC |
59.946 |
20 |
249 |
464 |
712 |
2 |
ATGCCACCAGGCTTATCAAC |
59.962 |
20 |
GCCATTAGGATGAGAGCAGC |
59.946 |
20 |
237 |
476 |
712 |
3 |
AACTTGCGAAATATGCCACC |
59.967 |
20 |
GGTCACTCAAGTCCAAGGGA |
60.088 |
20 |
128 |
464 |
591 |
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