 |
Simple sequence repeat (SSR)
>UN21160
TCGTTTGTAACCCATCCACTTTCATATGATCTCTAATCTGTTTTGGAGTAGCAACATGTGATCCACCGAGCTGCTGAAGCGCGTGAAGGAACCG
TCGGTGTAACTCCGGCGACCAACACCGCCTTTGCTTTCTACGCGTTTGCGATTGCGTTTGCGATTGTTGCTGATGTATATGTTCCTCTCCCCCT
TTACCAACAACACCACATGTCTCCGTGGTGGAGCTAGTGGTCGTCGCCGGCGCCGGCGCCGAAGCAACCACTTTCACCGCCGGAGCTGAATCAA
CCGCTTTCACCGCCGCCTGCTGCGGTTCAGCACTCTCGGAGAAAACGCGTTTTTTCTCTCTCTGAAACGGCTGGAACCCACCGCAGTTGCTGTT
GTTTGGTTTCACCTCAACCACTTTCGCCTTCTTACCTACTACACGTTCCGGATTAGACACCTCATTCGTGGTGTTTGTGTTCGTGTCCGGGGAC
GGATTCCATAGCTGAACAGATCTGAGCCAGTCTGATCTCTTAACGTTCTCTTCAGGTGGAGTTGGAGATTCGTGTTCGCCGTTTTCCTCGGTCT
TCTTGGTCGGGATAAACTCCTCTAAGACCGGACCACCGGAAACACTAGTCGTCTGCTCCGAACACTGCTCTGAGGTCGTTGAAGTACTCGACAG
CTCCTTCCGACACGCCTCTATAGCTTGCGTGACAAGCTCTAAACATAAAGGAAGCTCTCGTTGGAAGACTTGAATCTTCTTTTGTTCTTCTTCA
AGCGCTTCAACGTACTCATGACATCTCTGCATTTTCTGGGCGTCCATTTTCTGAAATTGTTATAATCAAAATCTGATATAATAGTAAGGAAGGA
AGCAACTGGTTTTTAGATCTATAGAGGAGTGGGTGTAGTTTGGTTCGGAAAGAATATTGGATCTAAATGGAATCAGATAGGAATAAACGTCGAG
AGATAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATGTTGTATATAAACAAGAAGCATCTCTTGATTACTAGACACTGAAAG
AAGTCAAAAATTATTTTTGTTTTTTGTTTGTTTGTGAAGTAGTAGGGTTTTGGTCTGATTTGATTTGATCTCTCCTGAGTTTTTGTCGGTTGGG
TTCTTTGTTTTATTTCTACAGTATTAGATCGACAAAAGAAAAAACAAAAAAAACAAAAAGGAGAGTTGTGGAGTGAGATCACTGCAGAAAGAAA
AAAAATGGGATCTTCTTCAGGACAAAGTGGATATGATCTGTCTTTCAAGATCTTGTTGATTGGAGATTCTGGTGTTGGTAAAAGCAGCTTGCTT
CTCAGTTTCATTTCCAGCTCTGTCCATGATCTTGCTCCCACCATAGGTGTTGATTTTAAGATCAAACAGCTGAAAGTAAGAGGAAAAAGGGTAA
AGCTTACAATCTGGGACACAGCTGGACAAGAAAAGTTCAGGACGTTGACAAGTTCTTATTTCAGAGGCTCCCAAGGGATCATTCTCGTTTATGA
TGTGACGAAAAGAGAGACGTTTCTGAACTTGGCAGATGTTTGGGCCAAAGAGATTGAGCTTTACTCCACTAACCATGACTGCATTAAGATGCTC
GTTGGCAACAAAGTCGACAGAGAATCAGAGAGGAAGGTAAGCCGAGAAGAAGGAACGGCTCTAGCCAAAAAACTCAAGTTTCTGTTTCATGAAT
GTTGCGCAAGAACCAGAGAAAACGTGAAGCAATGCTTTGAAGAGCTTGCTCTCAAGATAATGGATGTACCTAGTCTTTTGCAAGAAGGATCAAG
CTCTCTGAAGAGAAAACCGGATTTCAGAACTCATCAGAGCCGGTGCTGCTCGTGAGCTGTGTTTGATCATTGAAACCCGCCTAGGTTCTTTTGT
GTGTAAATTTATATAAAGACGAAGCTTGGCTTCTCTGTAAATCTCCTTATCAGTTCCTTAGATTGTTCTTCTTTTTTTTTGCCTCGACTGAGAT
TGTGTAATAATAAGTTAATAACCTCACTACACAGAAGAAAAGGAAAGCAAGACCAGCGTGTATCTTGTGTTT |
Primers for UN21160 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
GTGGGTGTAGTTTGGTTCGG |
60.269 |
20 |
CAACCGACAAAAACTCAGGA |
58.746 |
20 |
252 |
875 |
1126 |
| 2 |
TGGGTGTAGTTTGGTTCGGA |
61.323 |
20 |
ACAAAGAACCCAACCGACAA |
60.388 |
20 |
261 |
876 |
1136 |
| 3 |
GTGGGTGTAGTTTGGTTCGG |
60.269 |
20 |
CCGACAAAAACTCAGGAGAGA |
59.458 |
21 |
249 |
875 |
1123 |
|
|
