 |
Simple sequence repeat (SSR)
>UN21211
CAAAAGCGTCTTCTGACTCTAACCAATCGTGTCATTACTGAGATCACAGGCGCACACACACACACAGATAGAGAGAAGGAATAAATTAATGGAG
GTTTCAGTTTTGGTAGCGAGAAACTATTGAAGACGATCATGAACTGTCGTAGAATGTTACAGTCCGTGCAAGCCTTGTCGGCTCACAGCTTCCT
CTTCTGTTTCACCCTCGTTTTGGTCCTCAAACTCGACCACACCGTCTCTTACTCGTGGTGGGTTGTGTGTCTACCTCTGTGGGCTTTCCATGCT
GTTGTTTCAAGGGGTAGATTCTCTCTTCCTGCTCCTAACGCTCCTCGCAACCGTCATTGGGCTCCATGTCATGCTATTGTTGCAACTCCCTTGC
TTATAGCTTTCGAATTACTCCTCTGTGTATACCTCGAGAGTGCACATGCTCGTTCGCCACCAGCTGTGAGCTTGAAGATTGTTTTCCTCCCTTT
ATTGGCGTTTGAAGTAACTATACTTGTGGACAATGCCAGAATGTGTCGTGCGCTGGTGCCTGGAGATGAAGAGCACATAAATGATGAAGCAATA
TGGGAAGCGCTTCCTCATTTTTGGGTTGCAATTTCCATGGTGTTCTTTCTGGCTGCTTCAGTCTTCACCCTCCTAAAGCTTTCCGGTGATGTAG
CTGCTCTTGGTTGGTGGGATTTATTCATTAACTTCGGAATTGCACAGTGCTTTGCTTTTCTTATTTGTACAAAATGGTCCAACCCAGTTATCCA
TAGAGACTCACGTGTCAGAGAACCCGGGTCGTCATCTTCTACCAATACTAGATATGCTGTTTCCAACAGTGGCCTTCTGGATTTTCCAGAAGAC
GAGAGGCACCTTGATGAATTAATATGTGGCCTGCAAGATATTGGTGGTCATTTAATGAAAATCCCCCTTATTACATTTCAAGTGGTGCTTTGCA
TGCATCTCGAGGGGACTCCTGAAGCTGCTAAGTATATACCTGTCCCGGTCTTGTTTTCTCCACCCTTCTTACTGCAAGTCGTTGGTATTCTATT
TGCTGCTTCTAAATTAGTAGAGAAGTTTGTTCTGCTGCTCCGGGGAGATGATGATACAGGGTTGTATTTTAGAATTTCTTCCAGAGCCCATGAA
TGTTTGGGTTTCTTACACCATGGAACCAGGTTGTTAGGTTGGTGGTCAATTGATGAAGGAAGCCAGGAGGAGCAAGCTCGAATATACTTTGATC
AAGAGTTCGGATACAGTACCTTCTGTGGTCATCCGCCTGAAATAGTCAAGAAAATGCCTAAGAAAGATCTTGCTGAGGAGGTGTGGAGACTTCA
AGCAGCACTTGGTGAACAAACTGAAATCACAAAATTCAGTCAGCAGGAATATGAGAGACTGCAAAATGAGAAAGTGCTGTGTAGGGTTTGTTTC
GAAAGAGAGATCAGTGTGGTGTTGCTTCCATGCAGACACCGTGTTCTCTGCAGAAACTGCTCAGAAAAGTGTAAAAAATGTCCCTTCTGCCGTG
TAACCATCGAAGAGCGGCTCCCAGTATATGATGTTTAACGTCTTGACCATCTTCGATAAATGTATATATAATTGTAGAAGTACAGAGTTTATGA
TGAGTCGAGCTCTTTTCTAATTGCAATCTCTACATTTCTTCACATTTTGCTGTCTCTTTGTAGTGGTGTGAATCAACATTATTGAGTATTAGGT
CAACCAGAAGTCTCTATTGGATAAAAGATCTTTGTCTTAAGTTAAGACTTGTTGTCTATATATAACCCTTTACTC |
Primers for UN21211 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
TCTGACTCTAACCAATCGTGTCA |
59.788 |
23 |
AAACAACAGCATGGAAAGCC |
60.118 |
20 |
278 |
12 |
289 |
| 2 |
TCTGACTCTAACCAATCGTGTCA |
59.788 |
23 |
CGAGGGTGAAACAGAAGAGG |
59.837 |
20 |
194 |
12 |
205 |
| 3 |
TCTGACTCTAACCAATCGTGTCA |
59.788 |
23 |
TGGAAAGCCCACAGAGGTAG |
60.246 |
20 |
267 |
12 |
278 |
|
|
