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Simple sequence repeat (SSR)
>UN21212
GGGCCTCATCTCCTCTCTTTCTTCTCTCTCTCTCTCTCTAGATTTTGCTCATGAACTTGTCTTAAAATTCTCATTCTCATCAAACTAAACAAAC
AAAACAAAACACAACATGGGTCTCACTTCTCTTCAAGTTTGCATGGATTCTGACTGGCTCCAGGAAGCTGAGTCATCAGGAGGAAGCATGTTAG
ATTCTACAACAATTTCTCCAACAGCAGCCGAGATACTAGCTGCTTGCAGCACTAGACCACAAGCCTCGGCCATGGCTGTAGCCGCGGCTGCTCT
GATGGACGGTGGAAGGAGGCTGCGTCCACCTCACGACCATCCTCAGAAGTGTCCTCGTTGCGAGTCAGCGCATACTAAGTTTTGTTACTACAAT
AACTACAGCCTCTCTCAGCCTCGTTACTTCTGTAAAACATGTCGCCGTTACTGGACCAAAGGCGGCACTCTAAGGAATATTCCCGTCGGTGGTG
GCTGCCGGAAAAACAAGAAACCCTCTTCCTCTAATTCCTCATCCTCCACTTCTTCCGGGAAAAAGCCGTCCAACATTGTTACCACTAATACCAA
TGACCTTATGGCTTTAGCACAATCTCATCAGAATTACCAAAATGCCTCTCTGGGGTTCTCACATTTTGGTGGGAATGGGATGATGGGGTCTTAC
ACAGCTCTCGGTCATAGTAGCGTTGGTTTCTTGGAGAGCAAGTATGGCGGTTTGCTTTCACCAAGCCCTAGACCTATTGAATTTTTGGACAGTA
AGTTTGATCTCATGGGAGTGAACAATGACAATCTGGTCATGGTTGATCATGGAATTAACTGTGATCATCATCATCATCATCACATGGGTATGAA
TCACGGATTAGGTCTTAACAACAATAACCATGATGGGTTTCAGGGGATTTCTCCGGCAAACAACGGAAATGGTGGTGGTGGTCTCATGGATATA
TCTATAAGCCAGAGACTTATGCTAGCTAATTATGAACATCATCATGAAGATAATCAAAGAGTAACATCAATAATGGATGTGAAACCAAGTCCAA
AGCTGTTATCTCTTGATTGGCAACAAGGTCAAGGCTACTCAGATGGTAGCGGCAACGGAGGCGGTGGAAGATCTGACGGAGGTAGCGGTTATAT
CAACGGCTTAGGTTCGACGTGGAATGGTTTGATGAATGGCTATGGATCCTCTACTAAAACTAACTCCATGGTTTAATAAATTAATATCAGAACT
TTATTTCTTGTCGTTATCAACTGGTATTACAGAAGCAATTATATTAGTATATGGGTTTGTTC |
Primers for UN21212 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
CAAGTATGGCGGTTTGCTTT |
60.131 |
20 |
GAGACCACCACCACCATTTC |
60.223 |
20 |
235 |
697 |
931 |
2 |
CAAGTATGGCGGTTTGCTTT |
60.131 |
20 |
TATCCATGAGACCACCACCA |
59.762 |
20 |
242 |
697 |
938 |
3 |
AGAGCAAGTATGGCGGTTTG |
60.27 |
20 |
GAGACCACCACCACCATTTC |
60.223 |
20 |
239 |
693 |
931 |
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