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Simple sequence repeat (SSR)
>UN21425
CTTCCTCCTCTTTGAAAAATCCAATGGCTTCTCTCTCTCTGCCTGAAGAAGCAGCTTCGTATCACCGCCGTCGCTCCAAACGCTATCCCTCCTC
TTCCACCACCACCAACGGCGTCTCCGCCGCCGAATCTGTTCCCGACAAACGCCACAAGATCTTTCACGAATCCTCCTCGAGTCTCATATCTCCC
TCCGAGATCGAAGCAGAGTTCTCCCACCACGACCCCGCCTTCGCTCGGATCAACAACGGGAGCTTCGGCTGCTGCCCCTCCTCCGTCATCTCCG
TCCAGCGAGACTGGCAGCTCCGGTTCCTCCGCCAGCCGGATCGGTTCTTCTTCGACGACCTCAAACCCAGCATCTCCCAGTCCAGAGCCGCCAT
CAGACGCCTCATCAACGCCGAGCACGACGACGAAGTCTCCCTCGTCGACAACGCCACCACGGCGGCGGCCATCGTCCTCCAGCAGACCGCCTGG
GCCTTCCGGGAGGGGCGATTCGACAGAGGCGACGCGGTGGTGATGCTCCACTACGCCTTCGGCTCCGTCAAGAAATCGGTGGAAGCGTACGTCT
CACGCTCCGGCGGGGAGGTGATCGAGGTTCAGCTCCCGTTCCCGGTTAACTCGGCTGAGGAGATAATCAACCGGTTTAGAGCCGGTTTGGAGTT
GGGTAAGGCCAACGGTACCAGGAGGGTGAGGTTAGCGTTGATCGATCACGTGACGTCGATGCCTAGCGTTGTGATACCGATCAAGGAGCTTGTG
AAGATATGTAGAGAGGAAGGCGTTGACCAAGTGTTCGTTGACGCGGCTCACGGGATTGGTTGTGTCGACGTGGACATGAAGGAGATCGGTGCTG
ACTTCTACGCTAGCAATCTCCACAAGTGGTTCTTCGCGCCGCCTTCTGTCGCTTTCTTGTATTGCAAAAGGTCCGGTGGTGGTGGTGGTAGTAA
TCTGCATCACCCGGTTGTGTCTCACGAGTACGGTAACGGTTTAGCTGTTGAGAGCACGTGGGTCGGGACTAGGGACTATAGTGCGCAGCTGGTC
GTGCCATCGATTTTGGAGTTTGTGAACCGGTTCGAAGGTGGGATTGATGGGATAAAGAAGAGGAATCATGAGTCTGTGGTTGAGATGGGACAGA
TGCTGGTTAAGTCTTGGGGGACGCAGCTAGGTTGTCCGCCTGAGATGTGTGCGAGTATGGTTATGGTTGGGTTGCCTGTGTGCTTAGGTGTGTC
GAGCGAGTCGGATGCTGTGAAGCTTAGGAACCTTTTGAGAGAGAGGTTCTGCATTGAGATCCCGACCTACTATAGAGCGCCTGGTGAGGGGGAG
ACTGATGATTCGATCACCGGGTATGTTCGCATTTCGTTTCAAGTTTATAACAAACCTGAGGAGTATCATAGGCTTAAGGACGCAGTAAATGAAC
TTGTGAGAGGTGGGTTCAAATGCACGTCTCTATCTGATTGAATAAGGGTAACAAGCTATTTCGAGGTGGAGTAAATGAATAATGAATGCCTGGT
GGAAGTTATGATGGTTTAGGTACCATGAGGATTTGGGAAGAAGTGAAGTAGCCTATATATATGTATTTTCTAGTCAGGTCATAAAACATCTTCT
CAATACAGTAATGATTGTATGAGAAGACTTTGTAAGCATTCTTCTATTTCATTTGCTCGACATGTCTGTCTTAAAAACGTTAGCAACGTCGGTA
ATAAAGTAACAACGGTCACTATTTTCAGTGTTGTTGTTGGTTCGATGTCACTGTCTTAAAAAAAATCTTTAATTTTGTGTGTACGTTTATAATG
ATTCTCTAATTAAATCCATTGTTATTC |
Primers for UN21425 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
GAAGGCGTTGACCAAGTGTT |
60.156 |
20 |
CCACGTGCTCTCAACAGCTA |
60.199 |
20 |
234 |
768 |
1001 |
2 |
ACATGAAGGAGATCGGTGCT |
59.685 |
20 |
AACTCCAAAATCGATGGCAC |
59.939 |
20 |
229 |
826 |
1054 |
3 |
CGTTGACCAAGTGTTCGTTG |
60.19 |
20 |
CCACGTGCTCTCAACAGCTA |
60.199 |
20 |
229 |
773 |
1001 |
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