 |
Simple sequence repeat (SSR)
>UN21446
AATAAAAAAAAGATGGTAGATTCTTTTCTTTCTGAGTTTCAGTCTAAGTACACTGCAAACTTGTGATACACGTAAGCTCCACAGGTTTTTATTC
TTTCTTATCCCATGTTTAATAAGATATTAAGACACAGTGACAACAACATGGAAGAAGCATATACACTTTAGTGAGTTTAAGTGACTTTTTAATC
AACACTTGCTTATTGTTCCTTTGCATCAATCATACTTGCTCAAACTTGGGCTCCTCATCATATTCCCATTTTCTTCTTTTTGAAGAATCATCTC
TCATCCCCACCTTAGGGAGAGAAGAAAGAGTGAGGGAGAACTTTGTATGGATTGAGAATCCCCTTAGGGTCCAGCAACTTTTTGATGGATACCA
TTAATGCAACGGTTTCTGGTGATTTGCTGTAGAAGATTTCATTAGCTTTCATCACACCTAATCCATGTTCTGCACTGATGCTTCCACGGTGCTT
TGATGTCCACTCATAAACACGGTTCTATCAAACCTAAAAGCTTATCGTTATATTCCGCGGCTGAGATGTTTAAATGAAGATTACCGTCTCCAAG
ATGACCATATCCCATGACATTCGCTAAGCCATCTAATCTCCCTCTAAGGTCGTTGACAATATTGTAAATCTCTTCAACAGGTAAGGATAAGTCA
TACTTGTAACAAGCTCCTGCTTTCTGTAACGCCTCTGTTATGCCCTCTCGTATGCGCCAAAACGAGGATGCTTGGTTTATGTCTTGAGCTATCA
CGCCATCAGAGACTAAACCTTGTTCCAGTGACTTTAAAAGAAACGCTTCAAGCTTCTCCCTGTCATAAGTTTCACCACTTCCTGTTGTCTCTAT
CAAAATGTAAAAGTTCTCTGAAGAGGAAACTGGGTTACGGACACCGTCTAGGTGGTTAAGTACCAAATCCATGGAGTTGTTATCAAGAAACTCG
AAAGCGGACAGTATCTCTCCAAGATTTCTCTTTGCTTCAACAAGAAGTTTCTGGCAGCTGAGAAAGTCTTTGCAAGCGATGAAGGCTAAGTTTA
CAGAAGACATCTTTGGTTGTGTGAGTATAGAAACTTTAGTCACAATACCAAGTGATCCTTCACTACCGATGAATAAATGTTTTAAGTCGTATCC
AGTGTTGTCTTTGCGTAAAGTTCCAAGCATGTCAAGCACATTTCCATTTGCTGTGACAGCTTCTAGACCCAATACGGTTCCATGAAGTGAGCCG
TAACGGATAAGGCGCAAACCACCAGCATTAGTTGAAACATTTCCACCAATATGACAGCTTCCTTTTGCACCTAAGTCTAGAGGCATAACAAAAC
CTTTTGTGTCAAGGAAAGCTGCCAGATTTTCCAAAATGCATCCTGCTTCACACACCAAGACTCCACTAACCTCATCAAAGGACAAGACTTTATT
CATCAAACCAACATTGATGATCACCTCATCAAAGACAGGCACACTTCCACCAACAAGACCGGTGTTTCCTCCTTGAGGAACAACAGCTAAACTC
CTAGAATCACAATACTTAAGTATCTGAGACACCTCTTCTGTGTTCTTGGGCAAGAGCATCAGATTACTAGATCCTCTGTACTTATGCATCCAAT
CTGTATTAGCAATCTCGAGCCTCTCTTCATCTTCAACCACGTGTTTCTCGCCTAGTATCTCCTTGAAGTAGCTAACGTCTCTCGGTTCCAACGA
AGAAAACAATGGGTTTCTCTGGACTTTTGAAGCTACTGATGATGATGACCCAAACGATTTATACTGCTGCATCGTCCACAAGTTTCCACCAAGA
CATGGATGATGATGATGATGATGATGATCAAGCAGCTCTGTGTTACGACCCTTCCCAGCATTTGACTCAAAGGTCTTTCCTTTTGACTCGTAAC
GACTAACGAAGCCTGAAACAGAAGGAGACATTGAGTTATGTTTTTGTCGGAAACTACTTAGTGATGATTTACATGCAGATCTTATGAAATCTCC
TGATCTTCTCCATCTATGGATCATCATCGTTCTTTTCCTTCCTTGCACTTACGTCTCCGTCTCTCTTCC |
Primers for UN21446 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
TCGGTTCCAACGAAGAAAAC |
60.088 |
20 |
GGGAAGGGTCGTAACACAGA |
59.966 |
20 |
163 |
1680 |
1842 |
| 2 |
CTCGGTTCCAACGAAGAAAA |
60.22 |
20 |
GGGAAGGGTCGTAACACAGA |
59.966 |
20 |
164 |
1679 |
1842 |
| 3 |
CCACGTGTTTCTCGCCTAGT |
60.312 |
20 |
GGGAAGGGTCGTAACACAGA |
59.966 |
20 |
208 |
1635 |
1842 |
|
|
