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Simple sequence repeat (SSR)
>UN21511
GCTGAACAATTGGATCTGAGAGAAGTGAGAGAGAGAGAGAGAGAGAGAGAGAAGAGTAAGTGAAAAACAATGGAGAGAGAGGGGGAGGAGGAGA
AGAAGAAAGAGGGATCGTCGTATAGGTATTGGGTGAGAGAAGCCACACCAGACGCAGCTCCTCCTCCTCTCCCCCACAAGCTCACCAACAACAA
CAACAACAACGACGTCGTCTCTGCTGCTCCCAATGCTCCTATTCCCCTCGGCTCCCTCTGGAACAAGGCTGGCACTTGGGAGGAGAAAAATCTC
ACTAAATGGGCCACTGATCGATTAAAGGAGCTGCTGGGATCAGTCGGTTCTTTGCAATTTTCTTCTGGTAAAGCTGAGATTGTTGATGTTAACA
GATGCGTTGGAGATGCTTTCTTGGTGACAGTTCGGAACAAGAAAAGAGTTGGCTATACTTACGAGCTTTCCCTCAAAGTCCAAGGAGAGTGGTC
TTTTGAAGAGGACACAAAGAAGGTGAAGGGGAGTCTCGACATTGCTGAGTTCTCATTCGGCGAGCTCGATGATCTTGAGGTGGATGTGAAGCTT
AGCGATGACAAAGAGCTTTCCCAGCAATTGAAGCAGCTGATTAGGCTGGATATGAAGCAGTTCTTGGAGCCCGTGCGCCTGAAACTCGGCCAGT
TCGAGCAGGAACTCAAAGATCGATAGTGACTTGTTGTTCACATTGTCTTCTTCTTTTTGTTTCATATGATCCATTCACAGTTAGCATCGAAAAC
TTGGTTAAACACAGTATCGCATCTTAGCAGCTTCCTCTTTTGTATTCGTGCTACGTCTGTTTGCCAACACATCTCCTTTGATAGTCAGTTCAGT
TC |
Primers for UN21511 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
GGGGAGGAGGAGAAGAAGAA |
59.749 |
20 |
CGATCAGTGGCCCATTTAGT |
59.955 |
20 |
221 |
82 |
302 |
2 |
GGGGAGGAGGAGAAGAAGAA |
59.749 |
20 |
GAATAGGAGCATTGGGAGCA |
60.177 |
20 |
151 |
82 |
232 |
3 |
AACAATGGAGAGAGAGGGGG |
60.447 |
20 |
CGATCAGTGGCCCATTTAGT |
59.955 |
20 |
237 |
66 |
302 |
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