 |
Simple sequence repeat (SSR)
>UN21562
AAGATCATACGGAAATATTTTTATTGAATCTTATTGTGCTACTTAACTTATTTCCTTGTGTTACAGTTTTAAAAGTTGGTCTTCAAAACCACAA
ATCAAAAGAGTACAAGTGTCTTTCTCAACACTAAAATAACTCAAAAATCTCCATCATTGATTAAACAATTCTGATCAGACAAACATAACTTATG
GAGAGTGTTTTCTATAACTCATATATCCTCTTCTTAAGCTTCGGATCACAACTCGTCCTTGGAGTCACTTTCGGTAGTCTTTGTGGTGCTATCA
GGTTTGCCTTTGGTCTCAGTAGTTTCTACTTTTGGTGTGGACTCAACAGGTTTAGTAGATTCAGTTGATGCAGCAGGTTTCTCCAGTTTGAACG
GAATGGTTGCGTGTTTCCTCAAAAACTTGTAGAATGCAACCACAGTGCGGTCTGTATCTACAGTTATCGGTTCTGCGGTCTTGTTTCCTGCAGG
GAAGAAGAGAATTGTAGGGAATCCTTCGGCCTTCGCCTTGGGATGTTCATTGGTTGTTCCATCCATCTTGGCTATGACAAGAGAGTCAATGTCT
CGTAAATGTTTAGCAAGCTTGTTATACATTGGCTCAAGGGCTTGGCAATGGCCACACCATGGTGCGTAGACCTCGAGAAGAACATCCTTGGACT
CGTCCAGGACAATGTCATCAAAGTTATCTCCAACCACGATTTTCACATCTTCATCATTCTTTTCAGGAATAGGGTCTGACTTATAGAAAGGCTT
TAGCTTGTCGCTCAAGAACTCTTCCCCGAATGCCTTGATTTTATCAGACTTGATTTCACCATCGAAGAAGTGTTTTTTAGGATCTTCATTTCCT
GTGTAGGCAATAAGTTTAGGACCATTCCCAGACACACCAAAGTATTCAGCAACTGGCTTCCCATAATCTTCATTATCCAGATCCACAGATACAA
AGATGAGCTTTCCTTTAAATGATTTTGCTGCTTCTTCAAACTCTGGAAGAACCTTCTCTGATTCATTTTGTGTTACAAACAACAACACCTGCTT
CTTGATTGCACTCTCGAAAATCTCCGGTGCACTCTCTCTGGTGAACACGGAGACCAAAGGAAGCTTGTTGGCAGACACAAAACTAGCTATATCA
GACTTAACAAACTCCCCATCAAAATGGCTAATCTTCTCTGCTTCCCTCTTAACTAGAACAAGAGCAGGCCGTTTAGACTCAGGATCGATGTGGA
ACATCTTGGCAACATCAGGGTTCACTGTCTGATAGAAGTTCACATCGTCTTCAGCTTTGGACGCAGCAGCAAGCTGGTCGTACTCAACACCCAC
CAAAGAGTTCAAGTAACCCAACACCACTTTGTTCCCAGAAGTCAACACTTTCTCAGCATCATCTAACGTGGTTAGGTTATACACACCAGGACCT
ATCTTCTTCTTCACCCATGTCACAATAGTTTCTTTGGTCCTGCCTCCATTGTAAGGCTTGTGCTCTCCATCCACGAAGAACAGTATGGTGGGGA
AGCCCTGAACACTATACTGATGAGCGAGCTCGTTCTCCTCAGTGGCATCGATCTTAGCCAAAACGACGCCGTCTCCTTTAAGCTCGGTAGCGGC
CGCAGCGTACTCGGGAGCAAGAGACTGGCAGTGACCGCACCAGGGAGCGTAGAACTCGACCATAACGTACTGGTTCTTCTCGATCACGTCCGTG
AAGTTGCGCTGTTTGATGACCACCACGTCTTTCTCGTCGACTTCCGCCGGCGCCGGGAACGGATCTGAGTCCGGATCGGAGAGATCTTCTCCTC
CTTCGTCTTCGTCTTCGTCGCCGTACATCTCCGGATCTTCTTCTTCTTCTCCTTCGTTGAACTCGTCGAGCTCGGAGTCGGTGGAGTGAAGTGG
CTTGGTGGGGTGATCGGATCCTTCTTCTTTGGGGTCTTCGAGGAAGCTGAGATCTTCATCGTCGACGTCGGAGGAGGTGGCGAAAGAAGGAGAA
ACGGCGGAGAAAACGAGGAGAGCGGTGAGGAGAGAGAGGAGGAGGAAAACGCGGAAAGCCATTTTTAGTGCGA |
Primers for UN21562 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
TCCTTCGTCTTCGTCTTCGT |
59.989 |
20 |
GCGTTTTCCTCCTCCTCTCT |
59.957 |
20 |
242 |
1785 |
2026 |
| 2 |
CCTTCGTCTTCGTCTTCGTC |
59.989 |
20 |
GCGTTTTCCTCCTCCTCTCT |
59.957 |
20 |
241 |
1786 |
2026 |
| 3 |
GAAGTTGCGCTGTTTGATGA |
59.995 |
20 |
ACCAAGCCACTTCACTCCAC |
60.159 |
20 |
195 |
1692 |
1886 |
|
|
