 |
Simple sequence repeat (SSR)
>UN21611
ATAACACCAAAAGTACTCAAGATTGAGCTTAATTTATAACATTAAGAAAAAAATTTAGAGATTCTCAGACAAAAAAACCAAAAACAATAAAAAA
GGATGCAATGTATAAGTTAAAGACTTGAAAACAAAAAGAGCATTCTCTTCTACAAAGCTTCTACTCGTCGCTAAAGGTAGTCTTCTTACCTTCT
GAATGAGTCAAACTAGGTCTTCCACGACCGTTTTCTCTTCCTCTGCCACGACCACGGAAATTATCTCTTCCCCTGCCACGACCACGGCCACGAC
CACTGTCTCTTCCTCCGCCATAGTTGCTCCTTCCACTATTGAATCCACCACCATTGTTGTTTTCCTTCGGTCTAGGCTCATCAACAACGAGATT
CCATCCTCCCATTTCACTACCATTAAGTTCAAACGCCTTCTCTGTGCCTTCTTTAAATTCAAGGTAAGCAATTCCTCTGGAACCACCAGTTTCA
CGGTCAACGGGAACAGAGACTCTCGTGATCTCTCCACATGAAGCAAAGTGTTCACTCAAGGCGCTCTTGATATCATTCACAGGAAGAGAAGAGT
CAAATCCCTTCACGAAAACCTCTGCACCACCACCACCACCGCCGTTTCCGCTTCGGGGAGTGTTGTAAGCGGGTCTTTCACCCCTCTCCTGAGC
AACATCAAGACGAAGTTCACGACCAAGCAAAGGTCTCCCGTGAAATTCAAGTGCCTTCTGTGCTTCCCCGGCAGAAGCAAACTCAACATGGCCA
AAGCCTCTGAAACTGCCATCATCTTTAGACATGGCAAATCTAACATCAACAACTTGGCCAGCTCCCTTGAAGAATTCCTCAACATCTGATTTTT
CAACTTGGAATGGGAGATTGGCAACAAAGAGTGTCTTTGATCCTCCTGTGGCAGGAGTTGATGGTGTCTTTGGCTGTTGCTTTTCAGCATCCAC
CATTTCTACATCAGAGCTCTTTTTCTTTGGGGTTTCTTCCTCTTCTTCACTCTCAGACTCATCAGAGTCAGAGCCATCGCTACTGCTATCCTTT
TTGGCTGTCTTGGTCTCTTTTGGTGCGGGTTTTTCATCTTCACTTTCCTCATCAGAATCTTCCTCAGATGAATCTGACCCGCTTGCAGCCTTGG
TAGCAACAGGAGCTGCCTTCTTGGCAACAGGTTTCTCATCCTCAGATTCATCTTCTGAATCGTCCTCTTCAGAGGAGGAAGAATCTTTCACAGC
TGGCTTAGCTGCTGCAGGTTTCTTTGTAACAGCAACTTCTTCCTTATCTGAAGATTCCTCTTCGGAAGATGATTCATCTTTTGCCTTCTTTGCA
ACAGTTCCGTTTGTAGAAGCAACGGCCTTCTTTTGTGCGGGCTCCTTGTCCTCTTCCTCAGAATCAGACTCTTCATCAGAGCTCTCCACCTTCT
TGGGCACCTTCTTCTCAGCTTTTTCCTTTTGAACAGCAGCAACCAAGTCTTTCTTCTGCTTCTTAAGGTTCACTTTGGTATCCAAATCATCCTC
AGGCTCTCTCTTACCTTTCTTCAAAGGTTTTGTGGCCTTAATGGCAGCAGGGGCTGCTTCAGCTTTGGTGGCGGATTTTTTGCCCATTGCGAAT
TTGAGAAGAAGAAGACGACTGCTAGGTTTAGAGCTGCGTAAGATCC |
Primers for UN21611 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
AAGTGTTCACTCAAGGCGCT |
60.058 |
20 |
TCGTCTTGATGTTGCTCAGG |
59.984 |
20 |
156 |
516 |
671 |
| 2 |
AAGTGTTCACTCAAGGCGCT |
60.058 |
20 |
CGTCTTGATGTTGCTCAGGA |
59.984 |
20 |
155 |
516 |
670 |
| 3 |
AAGTGTTCACTCAAGGCGCT |
60.058 |
20 |
GGTGAAAGACCCGCTTACAA |
60.11 |
20 |
131 |
516 |
646 |
|
|
