 |
Simple sequence repeat (SSR)
>UN21699
GGGTCTCTCACAGACACAAACACTCTCCTTCTCTCTCTCTCAATCAGTGAAGTGATGTCGTCGTCTTCGTTTCGATCTCCGGCGGGCGCCGCCG
CCACTATGTTCTCGGCGGATCAGAAAATCAGGCTTGGGAGGCTCGACGTTTTGAGATCTTCTCATTCGGCTTTCTTAGGGAGAAATCCACGTGG
CGTCGTCTCGGTTCATCCTTCCTCTTCCTCCTCGTCGAGTCCTTCCCCTATCCAAGCCGTCTCCACGCCGGCGAAGTCTGAGACTACGACCAAG
CGGAGTAAAGTGGAGATAATCAAGGAGAAGAGCAACTTCATAAGGTATCCACTCAACGAGGAGCTTTTAACGGAGGCTCCTAACGTCAACGAGT
CCGCCGTGCAGCTCATCAAGTTCCACGGGAGCTACCAGCAGTACAACAGAGAAGAGCGTGGCGGAAGATCTTACTCCTTCATGCTCCGCACCAA
GAACCCTTCTGGCAAGGTCCCTAACCAGCTCTACTTGACTATGGACGACTTGGCCGACGAGTTCGGCATCGGAACGCTTCGTTTGACCACCAGG
CAGACGTTTCAGCTCCACGGTGTTCTCAAGCAGAATCTCAAGACCGTGATGAGCTCGATTATTAGAAACATGGGGAGCACTCTTGGTGCGTGTG
GTGATTTGAATAGAAACGTTCTTGCTCCTGCGGCGCCTTATGTGAAGAAAGACTATCTCTTTGCTCAGGAAACAGCAGACAACATTGCGGCTCT
GCTTTCTCCTCAGTCGGGGTTTTATTACGATATGTGGGTTGATGGTGAGCAGTTTATGACTGCTGAGCCTCCTGAGGTGGTGAAAGCTCGAAAT
GATAACTCCCATGGGACTAACTTTGTCGACTCTCCTGAGCCTATCTATGGCACCCAGTTCTTGCCTAGGAAGTTCAAGGTGGCTGTGACTGTGC
CTACAGATAACTCCGTGGACCTCCTCACGAATGATATTGGCGTTGTCGTCGTTTCAGATGAAAATGGGGAACCACAGGGTTTCAATCTTTATGT
TGGTGGCGGTATGGGAAGAACACACAGAATGGAGTCTACTTTTGCCCGCCTGGCAGAACCACTAGGTTATGTTCCAAAGGAGGATATTTTATAT
GCTGTGAAGGCCATTGTAGTTACACAGCGAGAACACGGGAGAAGAGATGATCGTAAATATAGCAGAATGAAGTATTTGATCAGCTCCTGGGGAA
TCGAGAAATTTAAAGGTGTTGTGGAGCAGTACTATGGTAAAAAGTTTGAGCCTTCCCGTGTACTTCCAGAGTGGGAGTTCAAGAGTTACTTGGG
ATGGCATGAACAGGGAGATGGTGCGTGGTTTTGTGGTCTTCACGTGGACAGTGGTCGTGTTGGAGGTATAATGAAGAAGACACTGAGAGAAGTA
ATAGAGAAATACAAAATTGATGTCCGCATCACACCAAACCAGAACATTGTGTTGTGTGATATAAAAACCGAATGGAAGCGTCCGATCACCACAG
TGCTTGCTCAGGCCGGCTTGCTGCAACCTGAGTTTGTTGACCCACTAAACCAAACGGCAATGGCTTGTCCAGCTTTTCCTCTGTGCCCTCTAGC
GATAACCGAGGCAGAGCGCGGAATCCCCAGCATTCTAAAGCGAGTTAGAGCAATGTTTGAGAAGGTTGGTCTGGAGTACGATGAATCTGTTGTG
ATAAGAGTAACCGGTTGTCCTAACGGCTGTGCAAGACCGTACATGGCTGAGCTTGGTCTTGTAGGTGATGGACCCAACAGCTATCAGGTTTGGC
TAGGAGGAACACCGAACCAGACACAGATAGCCAGGAGTTTCATGGATAAGGTGAAGGTTCACGACTTTGAGAAAGTCTTCGAGCCATTGTTTTA
TCACTGGAAAGTCGAGAGACAAACTAAAGAATCGTTTGGAGAATTCACAACTCGCATGGGATTCGAGAAACTCAAGGAGCTAATAGATACGTAT
AAAGGAGGTCCTCAGTAAGGAGGGATCAGCTTTTGGTCTATACAACTCTTGTGATGGAGAAACTTGTTCTTCTTTTGTACCCGCTTTTTTTTTT
TGTTTCCAATATCGCTTTGTCTTGTGTTGTAGACTTGTATTAGCACATCAATAAGCATCTCTTTTCATTTTTCTCTTTTTACTTTCTTTAGTGT
GATTTGATCTCCCTTCTTATTAAAAATGGCTTCTTTGCTC |
Primers for UN21699 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
GGGTCTCTCACAGACACAAACA |
60.197 |
22 |
CCACGTGGATTTCTCCCTAA |
59.926 |
20 |
188 |
1 |
188 |
| 2 |
GGGTCTCTCACAGACACAAACA |
60.197 |
22 |
GGATAGGGGAAGGACTCGAC |
59.896 |
20 |
241 |
1 |
241 |
| 3 |
GGGTCTCTCACAGACACAAACA |
60.197 |
22 |
TCCCTAAGAAAGCCGAATGA |
59.778 |
20 |
175 |
1 |
175 |
|
|
