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Simple sequence repeat (SSR)
>UN21739
CCTAAATCCTTCCACGGTTGTGTAAATTGTATTCTTGAGATGTTTTCAACATTTTCAGAGTCACGTTGGTATCTAAAAGTTTTAGTCTAAAACG
TTATTTCCGTCAAGAATCAAGCGACGACAATTGAAAGTTAACTAAAGAAATAGATTGTTCTTGAGTAACTTATACATAAAATAAAAAAGATTTC
AAGAGAAAAGAGCCGAGTAAAAGAGTACGTTCCAAGTATCAGGTAGACCAGGAAGACACCAATGGCTACAGTCATTACCAGGATGGTTACCACT
GTAAGCAGAAGGGTGAGCATCTTTACGAAGCTGAGATAGACCGGTTATGTCGAGCCAATAGACTGGTTTCTTCAATCTTCTAAACACTTTGTTT
AAAATCACCCAAGCCACTGGTGGCCCTCCTGGATACTTCCTCCCGTAGAATGGTTGTGTCTGACTCTTACATGACTTCAGTGGCTCTCCCCAAT
CCCTTCCATCGTAATGAACAGGAGAAACGCCATTGAAGAAAACCTTGGTCTTAGATGGATTGACGAATGCATTGACCCATCGAGCCCAAGTGGT
CATCCCTTTGTAATAAGCGACCAGTCTGTTCATGTCTTTGTACAATCTGTTCCCATCTTCCATGTAATCCCACGGCTGGATGTGATCAATATGG
GTCCACCAATGCCAACTGTTGAAAATCAAGACGTCCATGCCTCTCCACATCTTGCCTTGCTTAATGGAATCCAGCTTAAGCACTCGTCCAACGT
TCTCTGAATCTAAATCCACTAAGAACTGTGTTCTGTATAGCTTTAATGTCACTCCGTAGTCCTCGAAGGTGAGGGAAGCTAGACCCTTTTGGGT
AAGAAGAGTGTAACGAGCGTTAGGAACCCAAGCGTGAATTAGACAAGCAAGAGATTGCCACATGTTTGTGCTTAGTGAATCTCCAACGAACATT
ATCTTTTTCCCTCTCATCTTCCTCAAGAAATACAACCCATTGAATCTGGGGAGAGAGCAAGAGGAAGGTTGCCATCGATACTTAAGATAAAGAT
TGTCAGGACGACCATACTTCTTGCAGTTAAACTGTGGATCGATGAATGGACATTTATATGGATCGTAAAGTGGGTACGTTACATCATAAACCCA
ACTCCCTCTAAACCAATTGCATCTCCAAGAAGCTAGCTCTCTTCTTCCTCCTTCCTCGCCATTGTTTCTGCTTGTGTTGGTGTAAGCAGAAACT
GTGGAGAGACAGAGCAAGAAGAAGAAGAAGAAAAGAGAAGGGTTTTCTTGGGAAGAGAAACCCATTTTCTCTCGATCTGAGATTCAGATCCTCT
GTGTTTTCTGGCGAGAGATTGGTGTGTTGGAAAGATGTCCC |
Primers for UN21739 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
CTTCCTCGCCATTGTTTCTG |
60.766 |
20 |
TCCAACACACCAATCTCTCG |
59.676 |
20 |
169 |
1179 |
1347 |
2 |
CTTCCTCGCCATTGTTTCTG |
60.766 |
20 |
TGGGTTTCTCTTCCCAAGAA |
59.641 |
20 |
108 |
1179 |
1286 |
3 |
CCCAACTCCCTCTAAACCAA |
59.024 |
20 |
CCAATCTCTCGCCAGAAAAC |
59.813 |
20 |
214 |
1125 |
1338 |
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