 |
Simple sequence repeat (SSR)
>UN21811
GGGTACAAGAGACTTTCTCTCTCTCTCTCTCTCTCTCTAGAAAGAAAGAAAGAAGTCATCTATCTATCTATGTGATCCATTCCAACTGGGAGAG
ACAGAAAAAAAAATCAGAAAATCTCCTAGATCGTCGTCGTCGTTGAATCGTCAAACCCTGACCAGATATGGGTGGTGGAGTGAGAGAAGAGTAG
AAGAACGAGCGGATTATTAGGAGTCTTCTCAAACTTCCACACAACAAGAGGTGTATCAACTGTAACAGCCTCGGACCACAATATGTTTGCACTT
CTTTCTGGACTTTTGTTTGTACCAACTGCAGTGGAATACACCGTGAGTTTACTCATCGTGTTAAGTCCATATCAATGGCTAAATTCACTTCCCA
AGAAGTCTCTGCTCTAAAAGAAGGTGGCAATCAGCATGCTAAGGATATTTATTTTAAAGGACTGGATCAACAGATGCAGTCAGTATCTGACGGA
AGTAATGTCGAGCGATTAAGAGACTTCATTAGACAGGTGTATGTTAACAAAAGGTATACGAATGAGAAGAATGACGACAAGCCTCCAAGAGGAC
CGATGGGAGATAGTGAGACACGAAGTTCTAGCGGGTCTCGAAGTCCACCATATGATGATGTGTATGACCGTCGTTACAGCGGCAGATCAAGTCC
TGCTGGTCCAGGGTTCGACCAAGCTACCAGAAAAAGCCCTTCTCGTCCTGAGGTCATAAATGATTGGCGCAGAGAGGATAGGTTTGGTGGTGGG
AAAAAAACAGAAGAGGAGTCCCATTCACCACCTGAGCAAGTAAAAGACTCGGCTTCAGCTAGCCCCCCTCCTGTAGCTCGACCCGTTAGGGAAA
TTTTGGGTGACAGTTTTATTCCTCTTCGCGTGGTAGAGCCTCCGAAACCCCAAGTCAACCAAAATAACGATGCTTCAGCAAATGCAAAGCCTGC
TGCATTATCGACCTCGACAAATGAGAATCCACCAGAAGTGAAGCTGGAGACTGCTATAAGCTTGATAGATTGATGCTGATCCCGAACCTCCAGC
CCCATCTGTTGCAATACAAGCCACACCACAGCCTGATAGTGCAAGTAATGATAACTGGGCATCTTTCGGTGCTGCGCCCAGTGCACTGAGTTCA
AATGCATCTCAGTCACCAGTACCACCCAGTGGAAACACAGTGGATTCACTTCTCTCAGTTGGCAGCGCCTTCGTCCGTGCCAGTTCAGATGTCT
AGTGGACACGTGCATCTTGGTCATTTCTCATCACAAATCTTTGCACAACCTCCAAATGGGCATTCAAGGGAACAGCCATGGAACACGGGACTTC
CATCTAATGTACAAAGGTCAATGAGTGCACCGTCGTTTCAACCTCTTCAAGGAGTTCCTCCTGGTGGCCTGCAGTCTTCTGAAATCAAACCTCC
CGGAAGAACAGAATTACCTGCGGATTTATTCACTGTAACCTACCCATCATACTACGCAGCAGCGCCTGGGTGGCATGCTGGTCCACCACATGGT
ATGCATTATGGCATGCAGCAGTATAATAACACAGTGCAGCCTTTCCAGAATGTTCCACAGCAAGGGAAGTCAGTGAACCCTTTTGACTTCACCT
CTGAGCCACCATCACAGACACAACCAGAAACCATGTTCCCTTCCATGGCGCCTCTACAAAGTGCATTACCTCCTTCAGGCATGATGCCTTCTCA
AGGAGTACACAATCATTTCAGTATACCCTCTCAAGTCTCAGGCCATCCATCTGCAATGCCACCAAGGTTTATATCTCCTCAAACGCCAGGAAAC
ATGCCATCAAGCAATGTAAGCCCAATTGGGAACATGGGCGCTCCATATGAGACGCAACAAACATATCAGAATTTCGGAAGCCCATATGCCTCTG
CAGTTCCTTCGAACTCACCACCTTCTTTCTCTTCTGGAGGAAACCCGTTTGGGTAAGAATAGCAAGAACATTAGCTCGAAATCTGTAATGCTTT
TGAGGGATGATTGATTGGGCTCTTGGAAGTTTGAGTTCTAAAATGTGTGCAACCATTTGTTAAAAAGAGTGGACGAAAAGTGTGAGGCATGAAA
GTGGAGAAGAATTTGGGGTTTGTGTGGCTGTTAAATCATTTATTATAAGCATCATTTTGAAATGGCTCTATTATTATTATTATTATTATTATTG
TTATTATCATTATCATTACATTATTTGGTTTTCTATATTATTTCATTTCCCTTCT |
Primers for UN21811 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
GATTGATTGGGCTCTTGGAA |
60.014 |
20 |
GGGAAATGAAATAATATAGAAAACCAA |
59.111 |
27 |
231 |
1983 |
2213 |
| 2 |
GATTGATTGGGCTCTTGGAA |
60.014 |
20 |
GGGAAATGAAATAATATAGAAAACCA |
58.044 |
26 |
231 |
1983 |
2213 |
| 3 |
GGACGAAAAGTGTGAGGCAT |
60.119 |
20 |
GGGAAATGAAATAATATAGAAAACCAA |
59.111 |
27 |
169 |
2045 |
2213 |
|
|
