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Simple sequence repeat (SSR)
>UN02321
AACAGTTAACTTGTTGGATTCCTGATTTTATTTTGGGATAAAAAATCTGTCAACTCAACGTAAAGAATGGCAAGAGCAAGCAAACTTTGGAAGG
CATGCACATGGCTAAAGGGAACAAATCTGGTAGGAACTGTCAAACCAGAGAAATTTCATGTCATACTCTTATGAGTTTTATCTTTGACGTGTGT
GTGTGTGTGGAGTTTAGAGCAACATAGACTCTGGGGTCTCGATGTAGCCCTTGAATGCTTTCAACCATTCAGCTCCAATGGCACCATCTATTAC
ACGGTGGTCACAGCTAAGTGTTACAGGCATGTAAGAAGCCACGTTGAATTGGTCAGGGCCACTACCAGCAACAACTCTCTTCTCAGCGGATCCG
ATCGCTAGAATAGCAGCTTGAGGTGGATTGATGACAGCGCAAAACTGTTTGATGCCAAAAGGTCCGCCGAGGTTAGAAACTGTGAATGTTCCTC
CCTCGTAATCTTCAGGCTTCAAGCTGTTTTCTTTAGCCTTCTGAGCCAAGAATCGAACCTCTTCTCCAATTGTAGACAGCCCTTTCTTGTCCGC
GTCCTTGACAACAGGAACGTAAAGCCCGTTTTCTGTTTGCACTGCGACATTGATGTTCACATTGCTAAATTGGCGGATGTATTCGTCTGTCCAT
GAACTATTGCACTGAGGAACTTTTCGTAGAGCCAATGCAGCAGCCTTAATAACAAGATCATTTACAGATATACGTTTCCCGCCTGAAGCCTCTT
GAAATGAATTCA |
Primers for UN02321 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
ATGGCAAGAGCAAGCAAACT |
60.022 |
20 |
ATAGATGGTGCCATTGGAGC |
59.923 |
20 |
213 |
67 |
279 |
| 2 |
ATGGCAAGAGCAAGCAAACT |
60.022 |
20 |
CCAATTCAACGTGGCTTCTT |
60.11 |
20 |
268 |
67 |
334 |
| 3 |
ATGGCAAGAGCAAGCAAACT |
60.022 |
20 |
GCTACATCGAGACCCCAGAG |
59.827 |
20 |
170 |
67 |
236 |
|
|
