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Simple sequence repeat (SSR)
>UN22009
TTTAGGTGAGCTTTTGACAGAAGAAGACCAAAAGGTTTTCAAAATATCTTAGCTCTCTGGATGTTGAGGATGCTAAAGATGTGAAGTCTGGATA
CTCCATCACCTTTCACTTCAATCCCAACCCCTACTTTGAGGATGAGAAACTCATCAAGACTTTTACCTTCCTCGAAGAAGGGAGCACCAAAATC
ACAGCCACACCTATCAGGTGGAAAGAGGGCAAGGGCTTGCCAAATGGAGTGAGTCAGGAGAAGAACGGAAACAAACGTGCATTACCTGAAGAGA
GTTTCTTTACCTGGTTTAGCGATGCTCAACACAAGGAGGACCTTGATGTAGAGATTAACGACGAGCAGGTTGCGGATGTCATCAAGGAAGATCT
ATGGCCCAACCCTCTCACCTACTTCAACAATGAGGCTGATGAAGAGGATTTTGATGATGGTGATGATGAGGATGATGATGATGATGAGGGGAAA
GAAGGTGACTCTGATGAAGATGATGACGAAGAAGACAAAGATGGTGAGGAATGATGAGAGAGGTTCCTTCCCCATAAACCACATTTGCTTACAT
GTAATGTGTCAAGTTTGTGTGTTTGAATAGTTTTTTTAAAATTTACGCAAAATGTCTCATGACAACAAAAGACGAGGACAAGACAAGCTAGTAG
TATCTTTTGTTTGTATGAAAACTCTTTCCAGCC |
Primers for UN22009 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
TAGCGATGCTCAACACAAGG |
60.011 |
20 |
TGTGGTTTATGGGGAAGGAA |
60.162 |
20 |
255 |
299 |
553 |
2 |
TAGCGATGCTCAACACAAGG |
60.011 |
20 |
AGCAAATGTGGTTTATGGGG |
59.685 |
20 |
261 |
299 |
559 |
3 |
AAGATCTATGGCCCAACCCT |
59.789 |
20 |
TGTGGTTTATGGGGAAGGAA |
60.162 |
20 |
184 |
370 |
553 |
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