 |
Simple sequence repeat (SSR)
>UN22016
GGATAGTCGCTTTTCAGAACTCTTTTGCCGGCGATCCCCGTCTCTCTCTCTCTCCGAATAGGCAATTGAGATGGCAACTCCAATGGTAGAAGAC
ACGTCAAGCTTCGAAGAGGATCAGCTCGCGTCCATGTCCACCGAAGACATCGTTAGAGCTACTCGTCTCCTCGACAACGAGATTCGAATTCTCA
AGGAAGATGCACAAAGAACAAATCTAGAATGCGATTCTTACAAGGAGAAGATAAAGGAGAATCAGGAGAAGATTAAACTCAACAAGCAGCTTCC
TTACTTGGTTGGCAACATTGTTGAGATATTGGAGATGAATCCGGAAGATGATGCTGAGGAAGACGGTGCTAATATCGACCTTGACTCTCAAAGG
AAGGGAAAGTGTGTTGTCTTGAAAACATCTACACGACAGACAATCTTTCTACCAGTTGTTGGTCTGGTGGACCCCGATAGCCTGAAGCCTGGTG
ATTTGGTTGGAGTGAATAAAGACAGTTACCTGATTTTGGACACGTTGCCGTCAGAGTATGACTCTAGGGTTAAAGCCATGGAGGTCGATGAGAA
ACCTACCGAAGATTACAATGACATTGGAGGACTAGAGAAGCAGATCCAAGAGCTTGTAGAGGCAATCGTGCTCCCCATGACCCACAAGGAGCGT
TTCGAGAAGCTGGGTGTTCGTCCACCCAAGGGAGTGCTTTTGTATGGTCCTCCAGGGACTGGTAAAACTTTAATGGCACGTGCCTGTGCAGCAC
AGACTAATGCCACCTTCCTAAAATTAGCAGGTCCACAACTGGTCCAGATGTTTATTGGAGACGGAGCTAAACTTGTCCGTGATGCCTTTCAACT
AGCAAAAGAGAAAGCTCCATGTATTATCTTCATTGATGAAATCGATGCAATTGGTACAAAGCGTTTTGACAGTGAAGTAAGCGGAGACAGGGAA
GTGCAGAGGACTATGTTGGAACTGCTCAATCAGCTTGATGGATTCAGTAGCGATGAGCGTATTAAGGTGATAGCAGCCACTAACCGTGCAGATA
TTCTGGACCCAGCACTCATGCGTTCTGGTCGACTAGACAGGAAGATTGAGTTCCCACATCCAACGGAAGAAGCAAGAGCCAGAATCTTGCAGAT
TCACTCGAGGAAGATGAATGTACACCCAGACGTCAACTTTGAGGAGCTTGCAAGATCGACAGATGATTTCAATGGCGCTCAACTGAAAGCTGTA
TGTGTGGAGGCTGGCATGTTAGCTTTTTGTCGCGATGCCACAGAGGTGAACCATGAGGACTTTAATGAAGGTATAATCCAAGTCCAGGCCAAGA
AGAAAGCAAGTTTGAACTACTACGCCTAGTCTCTCCCTGTCAGTTATATTCGTGTTTGCTCTCTATCTTTCAACTAGTGTTTATTCCGGTTGGA
AACTTTTCATATTTTCGAATCAGGATATCTTTTATCAAAGTGCATTTAGTTTTGTTCATTTTATTTTTTTTTTGAAACAAGAAAAGGAACTTTG
ATAGTTTACCACCTCTTATAATTTTATTGTTGAATTGTGTTTGCCAGAAAAATTCATAAGTACATTTTAAGCAGTTTCTGTC |
Primers for UN22016 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
CGCTTTTCAGAACTCTTTTGC |
59.28 |
21 |
ATCTCGTTGTCGAGGAGACG |
60.408 |
20 |
170 |
8 |
177 |
| 2 |
TTTTCAGAACTCTTTTGCCG |
58.147 |
20 |
ATCTCGTTGTCGAGGAGACG |
60.408 |
20 |
167 |
11 |
177 |
| 3 |
CTTTTCAGAACTCTTTTGCCG |
59.141 |
21 |
ATCTCGTTGTCGAGGAGACG |
60.408 |
20 |
168 |
10 |
177 |
|
|
