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Simple sequence repeat (SSR)
>UN22235
GTTCCTATAGACCCATTTTCCTCCTCTCATTCCTCATTTTATTTTTATTTCAAGAAATAACATCTTTTATGTCACCACACAATAACCCATAAAA
TCAAAAATCGTTACCCACATTCTCTCATTCTATCCTAATCCTCATCACTCAAAACAGAGTGCTTAGGCGGAGAAGAAGAGGAAGAGGAACCAAA
CATCAAACAACAATGGCTGTCTCAACAATCTACTCAACACAAGCTCTTAACTCAACTCATTTCTTAACCTCTTCCCCTTCTTCCACCTCCTCCT
CCTCAAAACAAGTCTTCTTCTACCGTCGTCAAACCAACCGTAGATTCAACACCATCATCACTTGCGCTGCACAACAAACCGTCGTGATCGGACT
CGCTGCCGACTCCGGATGCGGCAAAAGTACTTTCATGCGGAGGCTGACAAGTGTCTTCGGTGGAGCCGCCGAGCCACCGAAAGGAGGGAACCCT
GACTCCAACACACTCATCAGTGACATGACCACCGTGATCTGTCTCGATGATTACCATTCTTTGGACAGAACCGGTCGCAAAGAGAAAGGAGTCA
CCGCTTTGGACCCACGCGCCAATGACTTTGATCTCATGTATGAGCAAGTCAAAGCTCTTAAGAGTGGTATCGCCGTCGAGAAACCTATTTATAA
TCACGTCACTGGACTTCTTGACGCACCTGAGCTTATTCAGCCTCCCAAGATTCTCGTCATCGAAGGTCTTCATCCAATGTTTGATGAGAGAGTA
AGAGACTTGTTGGACTTCAGTATCTACCTAGACATTAGCAATGAGGTCAAATTTGCTTGGAAAATCCAGAGGGACATGGCTGAGAGAGGTCACA
GTTTAGAGAGCATCAAAGCAAGTATCGAAGCACGAAAGCCCGATTTCGATGCATTCATCGACCCGCAAAAGCAGTACGCGGATGCGGTAATAGA
AGTGCTTCCAACGCAGTTGATTCCAGATGACAATGAAGGCAAAGTGTTGAGAGTGAGGCTGATAATGAAGGAAGGTGTTAAGTACTTCAGCCCG
GTTTATCTATTCGATGAAGGTTCTACCATCTCGTGGATCCCTTGTGGTCGCAAACTCACCTGCTCGTACCCTGGCATCAAGTTCAACTACCAAC
CTGATTCCTACTTCGACAATGAGGTTTCGGTTGTGGAGATGGATGGGCAATTCGATAGACTTGACGAGCTAATTTACGTGGAGAGCCATCTGAG
CAACCTCTCGACCAAATTCTACGGCGAAGTGACTCAACAAATGCTCAAACATGCTGACTTCCCTGGTAGCAACAATGGAACTGGTCTTTTCCAG
ACCATTGTTGGATTGAAGATCAGAGATCTCTATGAGCAGCTCATTGCCAACAAAGCCACTGCTCCTTCAGAAGCTGCTAAAGCCTAAAGCAAAT
ATAAGCAAAACAGAACGCGTCGATAAACCCATTGGTTGTTTCTTCTTTCTTTCTTTCTTTCTTTGTTTCCCGCGGATTTTCATGGCGAAAAGGA
CGGTGTTGCTTGTTTTGTAATTTGTGTGGAGATATAAAAAGAAAAGCCCGTAATGTAGAGAATTTATTAGCAGAGCAAAAGTTTTTTTTTTCTG
AGACTGGTCAAAGTTAACGATTGTATCATCTTATAATATAGATTCTATTATAAGATGATCAACTAATC |
Primers for UN22235 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
AAAGCCACTGCTCCTTCAGA |
60.134 |
20 |
TCCTTTTCGCCATGAAAATC |
60.016 |
20 |
137 |
1368 |
1504 |
| 2 |
TCTCGACCAAATTCTACGGC |
60.214 |
20 |
TCCTTTTCGCCATGAAAATC |
60.016 |
20 |
277 |
1228 |
1504 |
| 3 |
TCTACGGCGAAGTGACTCAA |
59.591 |
20 |
TCCTTTTCGCCATGAAAATC |
60.016 |
20 |
265 |
1240 |
1504 |
|
|
